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theislab
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scvelo
RNA Velocity generalized through dynamical modeling
https://scvelo.org
BSD 3-Clause "New" or "Revised" License
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TypeError: unsupported operand type(s) for -: 'str' and 'str'
#1209
suhuanhou
closed
4 months ago
1
harmony
#1208
Flu09
closed
4 months ago
0
scv.tl.rank_velocity_genes() Doesn't Rank All Genes
#1207
jwalewski
opened
5 months ago
1
python stuck while running sc.tl.velocity_graph with 0% progress but without showing error
#1206
didiren
closed
4 months ago
3
Update `scatter` and `update_axes`
#1205
WeilerP
closed
5 months ago
0
Add option to set aspect in scatter plots
#1204
WeilerP
closed
5 months ago
0
Unpin sklearn
#1197
WeilerP
closed
5 months ago
0
scv.vl.velocity_graph won't finish after hours with 0
#1196
didiren
closed
5 months ago
2
Unpin scikit-learn
#1194
Zethson
closed
5 months ago
0
scVelo "default" embedding?
#1193
Laura19993
closed
5 months ago
0
Comparing latent time
#1192
kylagelev
closed
5 months ago
1
Recover_dynamics() seems to not work on AnnCollections
#1191
jwalewski
closed
5 months ago
1
Remove hard scvi dependency
#1189
WeilerP
closed
5 months ago
0
recover_dynamics opens a new thread
#1188
AlessiaLeclercq
closed
5 months ago
1
Question about logarithmization in scvelo.pp.filter_and_normalize
#1187
elifdogandar
closed
5 months ago
0
module 'jax.random' has no attribute 'KeyArray'
#1186
spatts14
closed
5 months ago
20
Remove hard `scvi-tools` dependency
#1185
michalk8
closed
5 months ago
1
scv.pl.velocity_embedding_stream can't save pdf format. Solved.
#1184
wy-gi
closed
5 months ago
0
Add Subsetting by value
#1183
jwalewski
opened
5 months ago
0
Update _anndata.py - Clarify a bug & Add Subsetting Functionality
#1182
jwalewski
opened
5 months ago
0
A question about how use scvelo
#1181
Flu09
closed
5 months ago
0
Run scv.pl. velocity_ Embedding_ Stream error
#1179
JWJ13164328557
opened
6 months ago
1
Dynamic streamline plots
#1178
ilan-gold
closed
5 months ago
1
A question about computing the latent time based on known gene expression
#1177
HelloWorldLTY
opened
6 months ago
0
Velocity scores clarification and possible enhancement
#1176
jwalewski
opened
6 months ago
0
where to find the code/notebook for the figures on the scVelo paper
#1175
Tianran1
closed
5 months ago
0
Error when using scv.tl.velocity_graph
#1174
KforKuma
closed
5 months ago
1
Can scvelo be applied on long-read scRNA?
#1173
WeiCSong
closed
5 months ago
0
Question about applying moments to 'total' layer
#1172
lijc0804
opened
7 months ago
0
Question about combining AnnData objects for use in scVelo
#1170
jwalewski
closed
5 months ago
0
velocity_pseudotime: from scv.tl.latent_time vs scv.tl.velocity_pseudotime #3588
#1168
savagyan00
opened
7 months ago
1
scv.utils.merge does not combine the adata and ldata
#1167
smallfishcui
closed
7 months ago
2
Update `pyproject.toml`
#1166
WeilerP
closed
7 months ago
0
Update version for release
#1165
WeilerP
closed
7 months ago
3
Update `velocity_graph.py`
#1162
WeilerP
closed
7 months ago
0
Update docs
#1161
WeilerP
closed
7 months ago
0
Update docstrings
#1160
WeilerP
closed
7 months ago
0
Fix/unit tests
#1159
WeilerP
closed
7 months ago
0
Fix CI unit testing
#1158
WeilerP
closed
7 months ago
0
Update branch names
#1157
WeilerP
closed
7 months ago
0
Update CI to latest branch structure
#1153
WeilerP
closed
7 months ago
0
Update `ci.yml`
#1152
WeilerP
closed
7 months ago
0
Update Python versions in CI
#1151
WeilerP
closed
7 months ago
0
Add release workflow
#1146
WeilerP
closed
7 months ago
0
Wrong default layers in `proportions.py::proportions`
#1145
WeilerP
closed
7 months ago
0
Sharing Software Versions for Successful scvelo Execution
#1144
wlqtriumph
closed
7 months ago
2
splice and unspliced counts per gene and cluster
#1142
vasikara17
closed
7 months ago
0
[Question] Could we apply this method to Visium data (No polyA-tailed method)?
#1141
oghzzang
closed
7 months ago
0
Add release GitHub action
#1140
michalk8
closed
7 months ago
0
The result is contrary to the expectation, is there a better suggestion?
#1139
Jingle0814
closed
7 months ago
0
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