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tripal
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tripal_analysis_expression
Extension module for the Tripal toolset to show differential expression data. This module was made for Drupal 7, Tripal 3, and Chado 1.3.
GNU General Public License v2.0
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Fix incorrect case for obi CV; add update hook
#438
dsenalik
closed
1 month ago
0
Case error with OBI vs. obi for p-value term
#437
dsenalik
opened
1 month ago
0
Issue 430 add weights to insure correct order of javascript loading
#436
dsenalik
closed
1 year ago
0
Issue 434 Use fputcsv to properly escape when needed
#435
dsenalik
closed
1 year ago
0
Improper export of expression data for biomaterial with comma in its name
#434
dsenalik
closed
1 year ago
1
Issue 432 chado expression data loader
#433
dsenalik
closed
1 year ago
0
PHP8 error with "Chado Expression Data Loader"
#432
dsenalik
closed
1 year ago
0
Issue 430 fixes to download
#431
dsenalik
closed
1 year ago
0
The heatmap cannot be displayed, and the expression data cannot be downloaded.
#430
guichenzhu
closed
1 year ago
35
423 whitespace and typos
#429
dsenalik
closed
1 year ago
0
expression module
#428
hcj131518
opened
2 years ago
0
Issue 426 feature_cvtermprop value not always an integer
#427
dsenalik
closed
2 years ago
0
local__expression_details field assumes feature_cvtermprop value is an integer
#426
dsenalik
closed
2 years ago
1
424 functional changes
#425
dsenalik
closed
2 years ago
1
Functional changes for loaders
#424
dsenalik
closed
2 years ago
1
Minor changes and typos
#423
dsenalik
closed
1 year ago
1
Move up initialization of [0]['value'], issue #421
#422
dsenalik
closed
2 years ago
1
Error with data__gene_expression_data field if no expression data
#421
dsenalik
closed
2 years ago
1
Issue #419 sql returns only organisms with expression data
#420
dsenalik
closed
2 years ago
2
Expression Heatmap form lists all organisms, should list only those with expression data
#419
dsenalik
closed
2 years ago
1
Issue #417 ignore Id tags that are not a db
#418
dsenalik
closed
2 years ago
1
Steps 8 and 10 are trying to generate dbxref for ontology term
#417
dsenalik
closed
2 years ago
2
Issue #415 name vs. harmonizedname
#416
dsenalik
closed
2 years ago
1
Issue with Name vs. HarmonizedName arising from pull #411
#415
dsenalik
closed
2 years ago
2
Correct missed db name changes, issue #413
#414
dsenalik
closed
2 years ago
1
Residual db name changes missed in pull #411
#413
dsenalik
closed
2 years ago
1
Check these Functions
#412
spficklin
closed
2 years ago
2
Updated biosample importer namespace
#411
dsenalik
closed
2 years ago
8
Repair problem with sep__biological_sample widget
#410
dsenalik
closed
2 years ago
1
Hard-coded tissue/treatment terms in biomaterial
#409
spficklin
opened
2 years ago
0
Issue 407 changes just to sep__biological_sample field
#408
dsenalik
closed
2 years ago
10
Fields don't follow design requirements
#407
spficklin
opened
2 years ago
2
Issue 405 extend Biosample Browser sep__biological_sample field to Project
#406
dsenalik
closed
2 years ago
1
Use the sep__biological_sample "Biosample Browser" tripal field on Projects
#405
dsenalik
closed
2 years ago
1
Remove Composer files
#404
spficklin
closed
2 years ago
1
Fixes for gene_expression_data field
#403
spficklin
closed
2 years ago
1
The data__gene_expression_data needs reworking for web services.
#402
spficklin
closed
2 years ago
1
Error Populating the expression_feature MView
#401
spficklin
opened
2 years ago
0
Expression Data Viewer too big
#400
spficklin
closed
2 years ago
1
Bump url-parse from 1.4.4 to 1.5.10 in /tripal_analysis_expression/theme/build
#399
dependabot[bot]
closed
2 years ago
2
Expression data field crashes gene page
#398
spficklin
closed
2 years ago
1
Updated Expression Loader
#397
spficklin
closed
2 years ago
1
Expression Importer Uses SRA Experiment ID as Biosample
#396
spficklin
closed
2 years ago
1
Dependabot prs
#395
spficklin
closed
2 years ago
1
Expression loader is too slow
#394
spficklin
closed
2 years ago
1
Missing values not supported in Matrix format
#393
spficklin
opened
2 years ago
0
Updated BioSample Importer
#392
spficklin
closed
2 years ago
32
Bump url-parse from 1.4.4 to 1.5.7 in /tripal_analysis_expression/theme/build
#391
dependabot[bot]
closed
2 years ago
1
Bump follow-redirects from 1.5.9 to 1.14.8 in /tripal_analysis_expression/theme/build
#390
dependabot[bot]
closed
2 years ago
1
Bump ajv from 6.10.0 to 6.12.6
#389
dependabot[bot]
closed
2 years ago
1
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