tseemann legsta issues - Githubissues

tseemann / legsta

🍗⭐ In silico Legionella pneumophila Sequence Based Typing

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ERROR: Could not find 'any2fasta'. Please install it and ensure it is in the PATH.

#18 tbazilegith closed 1 year ago
3
use grep -q to play nice with bioconda docker build

#17 rpetit3 opened 2 years ago
0
ST update

#16 EricFournier3 opened 3 years ago
4
flaA allele 11 not detected

#15 marithetland opened 3 years ago
1
SBT from amplicons

#14 Mattstorey opened 4 years ago
5
Add --label option

#13 tseemann opened 4 years ago
0
neuA.fta headers

#12 motroy closed 4 years ago
1
Hi Torsen

#11 EricFournier3 closed 5 years ago
1
Use any2fasta to support lots of input types

#10 tseemann closed 4 years ago
0
Unwanted output saved to redirected file

#9 andersgs closed 5 years ago
1
Add new primer set for pilE gene 10 allele

#8 andersgs closed 5 years ago
2
pilE 10 allele is not found

#7 andersgs closed 5 years ago
0
Databases are out of date

#6 tseemann closed 5 years ago
1
Add --quiet mode

#5 tseemann closed 5 years ago
0
Handle empty FASTA file better

#4 tseemann closed 4 years ago
0
Add flag to save/print isPcr output

#3 andersgs opened 7 years ago
2
No result returned when finding a sequence with isPcr but it does not match exactly with anything in the database

#2 andersgs closed 4 years ago
1
might need to tweak isPcr settings a bit

#1 kwongj closed 6 years ago
1