ucscGenomeBrowser kent issues

ucscGenomeBrowser / kent

UCSC Genome Browser source tree. Stable branch: "beta".

http://genome.ucsc.edu/

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issues

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undefined reference to `knet_init_alt'

#89 martin-g closed 2 weeks ago
2
Fix coordinate range check for negative strands in mafNextWithPos

#88 ShahilPema opened 1 month ago
3
jksql.c pointer typing in gcc13+

#87 teaguesterling opened 3 months ago
0
netsyntenic -- avoid returning error for macos

#86 martenson closed 3 months ago
1
errors reported by axtchain

#85 yeeus closed 6 months ago
2
Question about classNet

#84 Marh32 opened 6 months ago
9
Fix chromToUcsc bug with online chromAlias files

#83 kuanyili closed 9 months ago
1
undefined reference

#82 taoqxtaozi closed 9 months ago
2
undefined reference to sqlSetIsUcscMirror

#81 RoelKluin closed 10 months ago
1
Bash reporting error

#80 andrewdavidsmith closed 1 year ago
1
Proposal to remove S:417/440/505 in branch specific mask list.

#79 aviczhl2 opened 1 year ago
0
Wait on mysql server start and stop.

#78 DailyDreaming closed 1 year ago
1
Update permissions on hgFixed.

#77 DailyDreaming closed 1 year ago
1
Incorrect number of bytes for empty slots in rWriteLeaves

#76 mdehoon opened 1 year ago
5
Provide Linux aarch64 binary for genePredToGtf

#75 martin-g closed 1 year ago
17
Where can I download the pslSplitOnTarget binary?

#74 danrans123 opened 1 year ago
2
src/lib/htmshell.c doesn't compile on aarch64 Ubuntu 20.04

#73 nathanweeks closed 4 months ago
2
Set locale explicitly to English

#72 SethosII closed 1 year ago
0
wigToBigWig doesn't work for chromosomes with spaces in name.

#71 philippguevorguian closed 1 year ago
3
Bioconda package for kent

#70 jayramr opened 1 year ago
4
`Response is missing required header Content-Length: for url `

#69 bschilder opened 2 years ago
11
module in src/hg can't make with MySQL 8^

#68 shiqi-yang opened 2 years ago
1
twoBitToFa: Can only handle version 0 of this file. This is version 1

#67 AlisaGU closed 2 years ago
1
bedGraphToBigWig: error while loading shared libraries: libssl.so.1.0.0: cannot open shared object file: No such file or directory

#66 hyjforesight closed 2 years ago
1
profile db not found in sqlProfileToMyCnf()

#65 Ziwei-Liu opened 2 years ago
0
Certificate validation (https.c) causing issues with build in v424

#64 Stikus closed 2 years ago
9
path issue for doBlastzChainNet.pl

#63 wthomas14 closed 2 years ago
2
FaToVcf reference issue.

#62 Salvobioinfo closed 2 years ago
4
Add error messages for cloud URIs when entering custom tracks.

#61 DailyDreaming closed 2 years ago
2
Blat not finding Sequence

#60 smoijueh closed 2 years ago
1
Support for limitted access

#59 lijxug closed 3 years ago
1
Improve nextstrain visualization. Should be ok but I didn't test the C code

#57 babarlelephant closed 3 years ago
2
No makefile in kent/src/lib

#56 johnyaku closed 3 years ago
6
How the #bin is generated in the downloaded annotation files?

#55 Shicheng-Guo closed 3 years ago
1
Fix linking Clang 11 compiled objects

#54 mbargull closed 3 years ago
3
Bug : URL redirection does not seem to work properly in UDC

#53 sanchit-saini closed 3 years ago
4
Install kent

#52 linzhangTuesday closed 3 years ago
5
can't build Bio-BigFile

#51 hkmztrk closed 3 years ago
8
Floating point error resulting in incorrect liftover results

#50 simonbrent closed 3 years ago
4
bigWigAverageOverBed output sort order

#49 gevro closed 3 years ago
1
netClass query

#48 ghost closed 3 years ago
2
Feature Request: REST API Support for selecting track Data using name identifiers

#47 sanchit-saini closed 3 years ago
7
rudpSend timed out & profile db not found in sqlProfileToMyCnf()

#46 yangyxt closed 3 years ago
3
Couldn't make directory ../trash/udcCache/

#45 morganecf closed 4 years ago
11
Support for chromosomes longer than 2^31

#44 SergejN closed 4 years ago
2
Update phylo genes

#43 iljungr closed 4 years ago
0
Portability for musl libc

#42 nathanweeks closed 4 years ago
0
Fasta sequence name validation

#41 yunhailuo closed 4 years ago
6
Gene tracks (UCSC Genes & NCBI RefSeq) show aminoacid sequence as generated from the genome, not from the actual transcript CDS.

#40 ifokkema closed 4 years ago
5
Support for long chromosomes for hgLoadGenePred

#39 SergejN closed 4 years ago
0