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viash-hub
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biobox
🌱📦 A collection of bioinformatics tools for working with sequence data.
https://web.viash-hub.dev/package/biobox
MIT License
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Add bases2fastq
#167
DriesSchaumont
closed
2 days ago
0
Add sgdemux
#166
DriesSchaumont
closed
2 weeks ago
0
Add fasterq dump
#165
DriesSchaumont
opened
2 weeks ago
0
Add cellranger_mkref
#164
emmarousseau
closed
2 weeks ago
0
Add Cellranger count
#163
emmarousseau
opened
4 weeks ago
0
Fix multiple components
#162
sainirmayi
closed
2 weeks ago
0
Cutadapt: fix non-functional action parameter
#161
DriesSchaumont
closed
1 month ago
0
FEAT: avoid using boolean_false
#160
DriesSchaumont
closed
1 month ago
1
Rseqc innerdistance
#159
emmarousseau
closed
1 month ago
0
Rseqc inferexperiment
#158
emmarousseau
closed
1 month ago
0
Fixes the typo raised in issue #132
#157
Grifs
closed
2 months ago
0
Rseq bamstat
#155
emmarousseau
closed
1 month ago
1
Dupradar
#154
emmarousseau
opened
2 months ago
2
SnpEff
#153
sumanm99
closed
1 month ago
0
Kallisto quant
#152
emmarousseau
closed
2 months ago
1
FIX: Make output quant file an optional argument
#151
sainirmayi
closed
2 months ago
0
Bedtools genomecov
#150
tverbeiren
closed
2 months ago
0
Add Kallisto index
#149
emmarousseau
closed
2 months ago
0
Umitools prepare for rsem
#148
emmarousseau
closed
2 months ago
4
Fq subsample
#147
emmarousseau
closed
2 months ago
1
Sortmerna
#146
emmarousseau
closed
2 months ago
1
Bcftools Concat
#145
tgaspe
closed
2 months ago
0
Bcftools Norm
#144
tgaspe
closed
2 months ago
0
Bcftools annotate
#143
tgaspe
closed
2 months ago
0
Bcftools stats
#142
tgaspe
closed
2 months ago
0
Bcftools sort
#141
tgaspe
closed
2 months ago
0
Bedtools bed12tobed6
#140
tgaspe
closed
2 months ago
0
Add rsem_merge_counts
#139
emmarousseau
closed
2 months ago
0
Add bbmap_bbsplit
#138
emmarousseau
closed
1 month ago
0
Bedtools links
#137
tgaspe
closed
2 months ago
0
Bedtools_intersect Bug Fixing
#136
tgaspe
closed
3 months ago
0
`bedtools_intersect`: failing unit test
#135
rcannood
closed
3 months ago
4
Bump Viash to 0.9.0-RC7
#134
DriesSchaumont
closed
3 months ago
1
Avoid duplicate code when unsetting multiple boolean arguments
#133
DriesSchaumont
closed
3 months ago
1
Falco typo
#132
sumanm99
closed
2 months ago
0
Add agat sp extract attributes
#131
Leila011
opened
3 months ago
1
Add agat sp ensembl output style
#130
Leila011
opened
3 months ago
0
Add agat sp complement annotations
#129
Leila011
opened
3 months ago
0
Bedtools genomecov
#128
tgaspe
closed
2 months ago
0
Add agat sp compare two annotations
#127
Leila011
opened
3 months ago
0
Add agat sp compare two buscos
#126
Leila011
opened
3 months ago
1
Add agat sp clip n seq extremities and fix coordinates
#125
Leila011
opened
3 months ago
0
Add agat sp alignment output style
#124
Leila011
opened
3 months ago
0
Bedtools GroupBY
#123
tgaspe
closed
2 months ago
0
Add agat sp add start and stop
#122
Leila011
opened
3 months ago
0
Add agat sp add splice sites
#121
Leila011
opened
3 months ago
0
Add agat sp add intergenic regions
#120
Leila011
opened
3 months ago
0
Add agat sp prokka infer name from attributes
#119
Leila011
opened
3 months ago
0
Bedtools merge
#118
tgaspe
closed
2 months ago
0
Add trimgalore
#117
sainirmayi
closed
2 months ago
0
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