waynebhayes SANA issues

waynebhayes / SANA

Simulating Annealing Network Aligner

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Added Math to F-Measure and Weighted Graph Changes

#158 dush1508 closed 4 days ago
1
WEIGHT and f measure changes

#157 dush1508 closed 2 weeks ago
0
Skeleton -f measure

#156 dush1508 closed 3 weeks ago
0
Preventing measure and format mismatch

#155 dush1508 closed 1 month ago
1
EGS_SGS multi measures

#154 kimiayazdani closed 5 months ago
0
Compilation / runtime exception issues on Cygwin

#153 bmlaw closed 1 year ago
2
added ec1 and ec2 measures

#152 daesang-yoon closed 1 year ago
0
pairwiseParallel from Leo

#151 MiuMiuMiue closed 1 year ago
0
added code under MULTI_MPI macro for pruning

#150 edlz closed 2 years ago
0
(2021-Nov-01): Yet another variation on MS3, with fixed merge errors

#149 Reevest29 closed 2 years ago
0
Using MPI to build and create initial shadow alignment with shared memory

#148 edlz closed 2 years ago
0
Revert "(2021-Nov-01): Yet another variation on MS3"

#147 waynebhayes closed 2 years ago
0
(2021-Nov-01): Yet another variation on MS3

#146 Reevest29 closed 2 years ago
0
demonstration for updating shadownetwork with MPI

#145 edlz closed 2 years ago
0
Working with Python

#144 ubalklen closed 3 years ago
1
new MultiMode for sana.multi

#143 edlz closed 3 years ago
0
new mode for multiSANA

#142 edlz closed 3 years ago
0
initial multi-SANA in MPI code

#141 edlz closed 3 years ago
0
fixed importance bug

#140 wangpatrick57 closed 3 years ago
0
Fixed pBad bug "Too few Samples for Linear Regression"

#139 Reevest29 closed 3 years ago
4
reimplemented MS3 default denom

#138 BotMichael closed 4 years ago
0
fixed "comparing variables of different types" warnings of MultiS3

#137 BotMichael closed 4 years ago
0
Type discrepency warning fixed

#136 Kellyyyy2333 closed 4 years ago
0
Merge SANA1.1 code to node_color branch

#135 Kellyyyy2333 closed 4 years ago
0
Merge SANA1.1 code to node_color branch

#134 Kellyyyy2333 closed 4 years ago
0
moved coreScore code out of SANA to measures/CoreScore file

#133 shu-g closed 4 years ago
0
Core scores are now printed to .naf instead of console

#132 shu-g closed 4 years ago
2
Add -ms3_numer and -ms3_denom as default when not specified

#131 Kellyyyy2333 closed 4 years ago
0
Clean comment codes; Change "if else" to "switch case" statements

#130 Kellyyyy2333 closed 4 years ago
0
ms3 implementation updates

#129 Kellyyyy2333 closed 4 years ago
0
Updated Dijkstra's code

#128 Tinameow closed 4 years ago
0
Updated Dijkstra's code

#127 Tinameow closed 4 years ago
1
memory usage reduction

#126 alexleeuci closed 4 years ago
0
Implemented various denom and numer types for ms3

#125 BotMichael closed 4 years ago
0
Implemented various denom and numer types for ms3

#124 BotMichael closed 4 years ago
0
Jaccard Similarity

#123 xwfye closed 4 years ago
0
fixed incremental error of SES objective function

#122 BotMichael closed 4 years ago
0
fixed incremental error of SES objective function

#121 BotMichael closed 4 years ago
0
implemented one variant of ms3

#120 BotMichael closed 4 years ago
0
1

#119 BotMichael closed 4 years ago
1
Working recursive local aligner with inefficient combination checking

#118 Tinameow closed 4 years ago
0
changed hillClimbingIterations to constantTemperatureIterations

#117 alexleeuci closed 4 years ago
0
hillClimbingIterations uses intial temperature set during simpleRun, rather than 0

#116 alexleeuci closed 4 years ago
0
changed initIterPerSecond so that it doesn't give a negative/Nan estimate when you provide the initial temperature

#115 alexleeuci closed 4 years ago
0
Merge pull request #1 from waynebhayes/SANA1.1

#114 BotMichael closed 4 years ago
0
fixed multipartite bug involving performChange & allowed .el files to use new multipartite mode

#113 rasulsafa closed 4 years ago
0
fixed stuff in comment

#112 alexleeuci closed 4 years ago
0
ips change

#111 alexleeuci closed 4 years ago
0
ips fixed

#110 alexleeuci closed 4 years ago
1
SPC measure does not work with SANA method

#109 TIXFeniks opened 4 years ago
1