wtsi-hpag Scaff10X issues

wtsi-hpag / Scaff10X

Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads

MIT License

20 stars 4 forks source link

issues

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Scaffolding with parental reads

#28 DustinSokolowski opened 4 months ago
0
Pigz installation

#27 Aragret opened 1 year ago
0
scaff10x still running after 22 days

#26 olechnwin opened 1 year ago
0
segmentation fault scaff_bwa.c

#25 GTG1988A opened 1 year ago
0
fix pigz-2.6 url

#24 DininduSenanayake opened 2 years ago
0
add gnuplot and inkscape to install.sh

#23 fredjaya opened 3 years ago
0
"Numbers of contigs are difference," error in "scaff_bwa-barcode"

#22 DustinSokolowski opened 3 years ago
0
how does scaff_reads works

#21 upendrabhattarai opened 3 years ago
0
scaff_screeN not found

#20 hyperoplus opened 3 years ago
4
pre n50 = scaff10x n50

#19 luiscunhamx opened 3 years ago
1
scaff_bwa segmentation fault

#18 shannonekj opened 4 years ago
3
scaff_reads: Segmentation fault

#17 zj-wien opened 4 years ago
3
segmentation fault

#16 BFeldmeyer opened 4 years ago
8
Floating point exception in break10x

#15 claumer opened 4 years ago
11
another seg fault issue

#14 macmanes opened 4 years ago
6
run fails at scaff_matrix

#13 dcopetti closed 5 years ago
8
segfault

#12 wheaton5 opened 5 years ago
10
can you update the docs to reflect the actual usage

#11 wheaton5 opened 5 years ago
0
cannot find input.dat

#10 dcopetti opened 5 years ago
2
Segmentation fault

#9 francicco opened 5 years ago
24
No scaffolding being done on the Scaff10xV4

#8 harish0201 opened 5 years ago
4
Recommended -blocks setting

#7 cabbagesofdoom opened 5 years ago
1
File Handling and Core Dumps.

#6 harish0201 opened 5 years ago
1
Scaff10X error of path in scaff_reads

#5 mzahm opened 5 years ago
0
buffer overflow detected

#4 arunprasanna83 opened 5 years ago
1
Update README.md to indicate (1) and (2) are XOR

#3 mp15 opened 5 years ago
0
Break10x runtime error - missing file

#2 JordideRaad opened 6 years ago
0
Fix file open messages to be more informative

#1 mp15 opened 6 years ago
0