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xjtu-omics
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msisensor-pro
Microsatellite Instability (MSI) detection using high-throughput sequencing data.
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docker image has error while loading libraries
#23
anoronh4
opened
3 years ago
8
Can macOS use msisensor-pro?
#22
lancermiss
closed
3 years ago
1
MSISensor distribution file only has 10+ base repeats. Where are datapoints for di-tri-quad-penta, etc repeats?
#21
ranasats
opened
3 years ago
2
chomosome typo
#20
Stikus
closed
3 years ago
1
Missing dependency in readme
#19
barslmn
closed
3 years ago
1
Add cram support
#18
PengJia6
closed
3 years ago
1
how to select the msi site for a target panel
#17
worker000000
closed
3 years ago
1
Parallel computing of the msisensor-pro baseline command does not work
#16
Schahrjar
closed
3 years ago
3
What kind of data to build the baseline? and How to deal with Panel data ?
#15
eilenilec
closed
3 years ago
2
more documentation on what the outputs mean?
#14
boyangzhao
opened
3 years ago
4
microsatellites located at some large mutation regions may be estameated as unstable one
#13
PengJia6
opened
3 years ago
0
fail to open bam file at baseline step
#12
arielyh
closed
3 years ago
7
MSI score greater than 1
#11
shanshenbing
closed
3 years ago
7
MMR mutations and MSI status
#10
asaki1986
opened
3 years ago
1
Scripts for user to determine the cuf-off of MSI-H and MSS/MSI-L ?
#9
PengJia6
opened
3 years ago
7
Why the default value is 1?
#8
jsonProgram
closed
3 years ago
2
Inverting tumour and saliva BAMs in tumor-normal paired gives the same results
#7
timothee-revil
closed
3 years ago
2
大批量肿瘤样品分析策略
#6
wangshun1121
closed
3 years ago
2
How to use custom MS file
#5
rained1989
closed
3 years ago
1
What is the cut-off value should I use?
#4
jsonProgram
closed
4 years ago
1
Is it possible to adapt this tool for running on VCF/MAF?
#3
jjgao
closed
4 years ago
7
bam index issue of baseline option
#2
asaki1986
closed
4 years ago
4
for bioconda
#1
PengJia6
closed
5 years ago
0
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