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zcang
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COMMOT
MIT License
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the stream by grid is outside of grid and is there parameters to adjust for this?
#38
brainfo
opened
2 months ago
0
How to input a customized distance matrix?
#37
duzc-Repos
opened
4 months ago
0
visium hd support
#36
revolvefire
opened
4 months ago
0
TypeError: _detect_vcs() missing 2 required positional arguments: 'expected_vcs' and 'path'
#35
uni987
opened
5 months ago
3
when I run“import commot as ct”，there is something wrong
#34
uni987
closed
5 months ago
0
Updated the requirements.txt
#33
stear-alec
opened
6 months ago
0
Update requirements.txt
#32
stear-alec
opened
6 months ago
0
How does commot calculates the number of L-R
#31
caiquanyou
opened
8 months ago
3
COMMOT in Seurat object
#30
nsdelablancac
opened
9 months ago
0
error' single positional indexer is out-of-bounds' when using 'ct.tl.spatial_communication'
#29
yao50985098
opened
10 months ago
1
Why do you solve 4-dimensional matrix `P` in four problems?
#28
YCH-bioinf
opened
11 months ago
0
How does commot calculates distance on visium data
#27
r-melo
opened
11 months ago
0
orientation of images in cell_communication output
#26
archanabhardwaj
opened
12 months ago
2
Usage of cell2location results in COMMOT for spatial interaction
#25
archanabhardwaj
opened
12 months ago
0
Crop and zoom into the sample for `plot_cell_communication`
#24
kuang-da
opened
12 months ago
0
Questions about slow running time
#23
HelloWorldLTY
opened
1 year ago
0
Module 'commot' has no attribute 'pp'
#22
sykesmarc
opened
1 year ago
0
Question about the COMMOT paper
#21
LixinyuLiu
closed
1 year ago
1
Questions about the meaning of arrow lengths
#20
RYY0722
closed
1 year ago
1
legend and image store in two separate files
#19
RYY0722
opened
1 year ago
0
Please refer to 'igraph' instead of 'python-igraph'
#18
szhorvat
closed
1 year ago
0
Comparing cell-type-level communication scores across samples
#17
kestrel614
opened
1 year ago
2
tradeseq is not working
#16
bernard2012
opened
1 year ago
2
Questions about dis_thr
#15
ysbioinfo
opened
1 year ago
0
ct.tl.communication_deg_detection error:Not all gene IDs are present in the models object.
#14
zwdylj
opened
1 year ago
3
Request for a parameter for a parallel task
#13
ScarletAmarantine
opened
1 year ago
0
Codes of simulation data generating
#12
Dawntown
closed
1 year ago
1
Error when run "ct.tl.communication_deg_detection"
#11
chen-zhan
closed
1 year ago
1
Question about understanding the output of cluster-cluster communication
#10
dongyuanwu
closed
1 year ago
1
Error in communication_deg_detection
#9
wJDKnight
closed
1 year ago
4
Error installation rvlib
#8
anidj
closed
1 year ago
1
IndexError: list index out of range
#7
QianChwnLyn
closed
1 year ago
1
IndexError: single positional indexer is out-of-bounds
#6
beibeiru
closed
1 year ago
1
About 'ct.pl.plot_cell_communication'
#5
CenviaTZC
closed
1 year ago
1
How to set 'dis_thr ' correctly?
#4
CenviaTZC
closed
1 year ago
1
I can't import commot
#3
Zhu-JC
closed
1 year ago
1
unable to install commot
#2
ayusyarif
closed
1 year ago
1
Could you provide a full tutorial?
#1
xiangrong7
closed
2 years ago
1