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zd1
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telseq
A software for calculating telomere length
GNU General Public License v3.0
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-u and -m flag output unclear; ideal k for read length of 150bp
#37
kruthikaiyer0990
opened
1 year ago
1
Can TelSeq be used for long read data (eg. PacBio HiFi)?
#36
artorias111
opened
1 year ago
0
non-human species
#35
guandailu
opened
1 year ago
0
Hg38 (GRCh38) Bam file
#34
Ruotian1412
opened
2 years ago
0
Short telomere length output - NovaSeq samples
#33
kacyng92
opened
3 years ago
2
version of software doesn't match repo tag
#32
keiranmraine
opened
3 years ago
3
Telseq for DNBseq
#31
tomoconaka
opened
4 years ago
0
Secondary and supplementary reads
#30
lindenb
opened
4 years ago
0
TelSeq does not compile with modern versions of bamtools
#29
stephan-hutter
opened
4 years ago
1
Error while using a list of paths
#28
wbh0912
opened
4 years ago
0
Adaption of repeats
#27
emmannaemeka
opened
4 years ago
0
telseq on cram files
#26
jalwillcox
opened
5 years ago
2
-m leads to 0 reads mapped in output
#25
kgaonkar6
closed
5 years ago
3
Why is a BAM file needed?
#24
pdiakumis
closed
6 years ago
1
Harden telseq against integer overflows
#23
edawson
closed
6 years ago
2
Any Way to Use Telseq to find other repeats?
#22
jerryyyyy
closed
5 years ago
0
Quick question: counting of aligned vs unaligned reads
#21
jamesdalg
closed
5 years ago
1
location of files needed if bamtools path is not functioning
#20
jamesdalg
closed
5 years ago
3
Recommendation of k for 35bp and 49bp reads
#19
SiyangLiu
closed
5 years ago
3
Can telseq be used for custom panels?
#18
dilmiperera
closed
5 years ago
1
Docker Version
#17
jerryyyyy
closed
6 years ago
5
Bamtools Not Found
#16
jerryyyyy
closed
6 years ago
7
Compilation problem
#15
berntpopp
closed
5 years ago
5
Deploy in unix cluster
#14
kruthikaiyer0990
closed
5 years ago
1
Use telseq on other genome?
#13
kumatang
closed
5 years ago
9
Error when installing
#12
danielecook
closed
7 years ago
4
Estimating telomere length for other organisms
#11
danshu
closed
7 years ago
6
Bamtools installation location
#10
lachlansimpson
closed
5 years ago
9
UNKNOWN length estimate using exome sequencing data
#9
ikramu
closed
5 years ago
3
LENGTH_ESTIMATE units
#8
JenniferShelton
closed
5 years ago
6
telseq on exome sequencing data
#7
ikramu
closed
5 years ago
4
Support for multiple telomeric repeats and faster run time
#6
fpbarthel
closed
5 years ago
4
Create Release
#5
danielecook
closed
9 years ago
2
Possible to specify custom telomere sequences
#4
danielecook
closed
9 years ago
2
Cannot install on mac
#3
danielecook
closed
9 years ago
1
Batch effect?
#2
fpbarthel
closed
5 years ago
3
Weighted means
#1
fpbarthel
closed
5 years ago
4