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zeeev
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wham
Structural variant detection and association testing
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HG002 results suspiciously bad
#64
jdidion
opened
1 month ago
4
if the dirty build doesn't work on ubuntu, due to gcc issues, this docker approach worked for me
#63
sasidharPasupuleti
closed
10 months ago
1
Fix the seed of random num generator
#62
VJalili
opened
1 year ago
1
FATAL: No SM tag in bam file.
#61
mvheetve
closed
1 year ago
2
[Question] Is Linux ARM64 supported ?
#60
gancho-ivanov
opened
2 years ago
4
Meaning of AT Parameters?
#59
GWheelerEB
opened
2 years ago
0
Output vcf file: ALT is not sequence
#58
quentin0515
opened
3 years ago
0
Bam file not being read
#57
drashwinelkar
closed
1 year ago
1
Wham installation fails
#56
cccnrc
opened
3 years ago
2
error: INFO: processed 0 reads for BAM file
#55
cccnrc
opened
3 years ago
3
installation fails
#54
masen1991
opened
4 years ago
0
WHAM-BAM finished normally
#53
liufy11
closed
4 years ago
2
Workflow for large number of genomes (Population)
#52
djakubosky
opened
4 years ago
4
Stochastic output
#51
mwalker174
opened
4 years ago
1
classify_WHAM_vcf.py issue
#50
JuanmaMedina
opened
5 years ago
2
installation fails undefined reference to BamTools functions
#49
wiraki
opened
6 years ago
7
Empty output file
#48
Addicted-to-coding
opened
6 years ago
5
Update to Makefile needed for updated bamtools build.
#47
srynobio
opened
6 years ago
6
All the detected variants with genotype missing
#46
ivangalvan
closed
6 years ago
1
Genotyping
#45
woodoo46
closed
6 years ago
2
Swap (unsigned long long) for (long long) to fix narrowing error
#44
edawson
closed
7 years ago
1
narrowing conversion error during installation
#43
Suncuss
closed
7 years ago
7
About -e $EXCLUDE
#42
xie186
closed
7 years ago
2
tags
#41
fizwit
opened
7 years ago
1
Floating Point Exception
#40
akkellogg
closed
8 years ago
2
FATAL: Unable to gather stats on bamfile
#39
LeileiCui
closed
8 years ago
12
whamg trouble - finishing instantly with no results
#38
afkoeppel
opened
8 years ago
8
Devel
#37
zeeev
closed
8 years ago
0
WHAM taking too long to run
#36
abolia
closed
8 years ago
2
[enhancement] bam lists
#35
tycheleturner
closed
8 years ago
1
No genotype done in the current version WHAM-Graphening
#34
ghost
closed
8 years ago
3
Buffer overflow for WHAM-GRAPHENING
#33
nvolkova
closed
8 years ago
13
segmentation fault with wham-bam
#32
sahilseth
opened
8 years ago
4
translocation test cases
#31
zeeev
opened
8 years ago
10
Issue with parenthesis in print, using python 3
#30
sahilseth
closed
8 years ago
8
Error installation (buildWHAMBAM), collect2: error: ld returned 1 exit status
#29
sahilseth
closed
8 years ago
3
use schedule dynamic 1 for bam stats.
#28
brentp
closed
8 years ago
0
pull SUP[1]
#27
brentp
closed
8 years ago
0
pull ID from vcf id field if present, then check INFO['ID'].
#26
brentp
closed
8 years ago
1
Flags in the info field
#25
abolia
closed
8 years ago
4
-m flag vs NC from info field
#24
abolia
closed
8 years ago
2
Multi sample running
#23
ghost
closed
8 years ago
10
Filtering the VCF file
#22
abolia
closed
8 years ago
7
Detecting translocations on same chromosome
#21
abolia
closed
8 years ago
2
ERROR: wham vcf as an input to MetaSV
#20
wjaratlerdsiri
closed
8 years ago
8
FATAL: was not able to gather stats on bamfile
#19
gabyrech
closed
8 years ago
13
Ability to add flat files for options and skip complex regions.
#18
srynobio
opened
8 years ago
0
Seg fault in initPriors during genotyping
#17
chapmanb
closed
8 years ago
9
GATK compatible GLs in VCF output
#16
chapmanb
closed
9 years ago
9
Debugging VCF output: FORMAT, REF alleles and mergeIndvs
#15
chapmanb
closed
9 years ago
1
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