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zhengrongbin
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MEBOCOST
A python-based package and software to predict metabolite mediated cell-cell communications by single-cell RNA-seq data
BSD 3-Clause "New" or "Revised" License
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Is it feasible to measure the content of various metabolites in bulk RNAseq using MEBOCOST?
#30
shineshen007
closed
1 week ago
2
Can’t open the tutorial file
#29
wuxiangning
closed
1 week ago
1
Is it feasible to measure the content of various metabolites in cells using MEBOCOST?
#28
jouska540
closed
1 week ago
1
Error in infer_pathway
#27
aboutfanfan
closed
1 month ago
1
RuntimeError: Colorbar layout of new layout engine not compatible with old engine, and a colorbar has been created. Engine not changed.
#26
seekning
closed
4 months ago
1
'ERROR:
#25
seekning
closed
4 months ago
0
met_ann = None, but used in infflux and efflux (vignette)
#24
NeuralBind
closed
4 months ago
2
No communication events under pval_cutoff:0.05 and comm_score_cutoff:0, try to tune them!
#23
AcetylCoALab
closed
4 months ago
2
Can enzyme genes contributing to the inferred metabolite be extracted?
#22
YaoyJiang
closed
5 months ago
1
KeyError: "None of [Index(['met', 'hmdbID'], dtype='object')] are in the [columns]"
#21
KunFang93
closed
6 months ago
5
conflict colorbar
#20
alastark
closed
8 months ago
3
Respectful Suggestions to Enhance MEBOCOST
#19
wu-yc
closed
7 months ago
1
Interpretation of Single-Cell Metabolite Estimation Results Using MEBOCOST
#18
looppy95
closed
8 months ago
4
how to manually add new metabolites-sensor pair
#17
KarryGoCarry
closed
1 year ago
5
Changed xlmhg to xlmhglite
#16
momen-mh
opened
1 year ago
0
I am curious about the communication score and have a question.
#15
mybioinformatics
closed
8 months ago
3
Error
#14
elifozcelik
closed
1 year ago
0
The color that indicates the -log10(FDR)
#13
M1chelGom3s
closed
8 months ago
2
metabolic communication inference
#11
flamesrui
closed
4 months ago
4
TypeError: ranksums() got an unexpected keyword argument 'alternative'
#10
HDEzhsw
closed
1 year ago
1
DEMO dataset also showed some errors
#9
jiangzh-coder
closed
1 year ago
6
urgent! TypeError: no supported conversion for types: (dtype('O'),)
#8
jiangzh-coder
closed
8 months ago
9
Config path error
#7
jackbrougher
closed
2 years ago
4
TypeError: get_xlmhg_stat() takes from 3 to 4 positional arguments but 6 were given
#6
semenko
closed
2 years ago
1
save the image
#5
1378989
closed
2 years ago
1
Proportions and Normalisation
#4
dbdimitrov
closed
2 years ago
4
Comparing cell-cell communication among different conditions
#3
liaojinyue
closed
1 month ago
5
error in "Inference of pathway to the communications"
#2
LipingChen0607
closed
2 years ago
2
Different results by the same codes and data
#1
DrZGQ37
closed
2 years ago
5