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3UTR
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DaPars2
Dynamics analysis of Alternative PolyAdenylation from RNA-seq
GNU General Public License v2.0
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Step 2: Generate mapped reads files for all samples
#27
herber4
opened
1 month ago
0
Dapars_LR can be used for nanopore transcroptome data?
#26
liangdp1984
opened
7 months ago
0
TC3A only contain tumor APA data?
#25
NJU-Bio-Info
opened
7 months ago
0
Request for Sharing TCGA APA Data
#24
RolleiBear
closed
7 months ago
0
DaPars 2 for long reads
#23
ArthurDondi
opened
1 year ago
0
Breakpoint detection does not work in long read data
#22
ArthurDondi
opened
1 year ago
0
installation package address
#21
Li-mengjie
opened
1 year ago
0
How to obtain the site of distal PAS?
#20
yiyisun682
opened
1 year ago
0
Generating ID_mapping_FILE
#19
ytakemon
opened
1 year ago
1
Long reads APA anlysis
#18
MustafaElshani
opened
1 year ago
1
PDUI=NA
#17
liyangyang12
opened
1 year ago
1
How to identify APA events of great significance?
#16
NJU-Bio-Info
opened
2 years ago
1
Error: No gene bed file!", file=sys.stderr
#15
FilipaMendonca
closed
2 years ago
0
Why is DaPars2_Multi_Sample_Multi_Chr.py hardcoded for human genome?
#14
dzhaobio
closed
2 years ago
1
Can DaPars2 be used for differential APA analysis between tumor samples and normal samples ?
#13
Cristinawangting
closed
2 years ago
1
ValueError: invalid literal for int() with base 10: ''
#12
Cristinawangting
closed
2 years ago
0
The directory of output was wrong
#11
Joey-xty
closed
2 years ago
1
Problem
#10
zenglongjin
closed
2 years ago
1
Updated Dapars2_Multi_Sample.py
#9
seriousbamboo
closed
2 years ago
0
DaPars_Extract_Anno.py - coordinates in output BED file (and 'Loci' column) are shifted 1 nucleotide from source transcript
#8
SamBryce-Smith
closed
2 years ago
1
What does fit_value mean in the output?
#7
algaebrown
closed
2 years ago
1
What does NA represent in the original PDUI matrix？
#6
AIBio
closed
2 years ago
1
The output file is empty
#5
shichenyan
closed
2 years ago
4
hg19_4_19_2012_Refseq_id_from_UCSC.txt #9
#4
ghost
closed
3 years ago
1
tc3a.org Website：18.223.209.34‘s server 403 Forbidden
#3
PinkSmallFan
closed
3 years ago
1
what does each column of hg19_refseq_whole_gene.bed means?
#2
yx-xu
closed
3 years ago
0
Could you provide example files of configure file ,chrname,depth_file.....
#1
ghost
closed
3 years ago
0