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Hello
i am running rfmix and provided the below code and required file, however it look everything was working fine, however, there was no output even after 3 hours waiting .
shailesh@shailesh-HP…
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Hello there,
Thank you for your great work on this software. I have encountered this error while trying to run BridgePRS using my East Asian and European ancestry data. My command line is as found be…
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Hello,
we are trying to optimize our pipeline of phasing and imputation using Eagle and Minimac4 and the 1000 Genomes reference panel and we would like to know your suggestions regarding the best s…
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Hello:
RFMIX v2.03-r0 - Local Ancestry and Admixture Inference
(c) 2016, 2017 Mark Koni Hamilton Wright
Bustamante Lab - Stanford University School of Medicine
Based on concepts developed in RFM…
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As our work on this package progress, this issue can help us enumerate possible future features of the package depending on the time and interests of contributors. Some features will be needed for th…
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Add a new ancestry method for mandible. Ability to add mandible morphometric data for HUMANiD
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Hello.
For chromosome 6 to 22, it works fine. But I am getting segmentation fault only for the first 5 human chromosomes.
> Loading genetic map for chromosome 1 ... done
> Mapping samples ... …
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Can you advise on how best to filter a raw VCF filter for input? Can the VCF file contain a mixture of SNPs/INDELs or only VCF files that have been filter for SNPs only?
I get the following error:…
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Hi,
Thanks for the invaluable tools and tutorial resources you provided!
I am currently working with imputed data from the UK Biobank, and I have encountered a challenge regarding the storage si…
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HWE (x)
association testing
Ne
parentage
genomic prediction
manhattan plots
SFS
abc
plots with circos
abba/baba
plotting on maps (pop assignments, ect).
assignment (fastStructure calls and …