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Is there a way to include multiallelic loci in the binary genotype data. I tried to do the following:
binary_matrix
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I am working on skin tissue samples. I am using steinbock with deepcell. I was wondering if there is functionality to measure intensities by user defined borders? My goal is to measure intensities in…
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How can I find the residue position for a custom label?
const MyProvider = {
label: (loci) => {
if (StructureElement.Loci.is(loci)) {
const loc = Struc…
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Locus breaker identified 41 loci for 40 proteins in which the boundaries' of the locus were the same.
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Hello,
Thank you very much for a nice package!
My question is: can one use allelefrequencies data to calculate relative usage of different loci in a population or ethnic group? Does it actually …
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### Description of the bug
Hello again!
After solving previous problems https://github.com/DIncalciLab/samurai/issues/19 I rerun the pipeline but after a while I'm getting a new error related w…
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Dear DiffSegR developers,
Thank you for the very powerful package!
I was just wondering: is it possible to add more than a single locus to the loadData() step? Would it be possible to run the pac…
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New BUAP user working on a Mac laptop (we'll get him signed up to GitHub momentarily). Every time he makes a new locus number, FM crashes. The locus is there when he logs back in, but that's weird.
…
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Hello!
I am having some problems with the prepareHTS step, using WES bam files.
_This is the script:_
ascat.prepareHTS(
tumourseqfile = "/proj/nobackup/ascat/data/116_cycle2.recal.bam",
n…
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**Describe the bug**
caMicroscope viewer launches and fails to find TileSource for 5 seconds: in white in the background "Unable to open [object Object]: HTTP 404 attempting to load TileSource" and i…
2grep updated
4 weeks ago