-
Hello,
I found your model is very useful for our starmap data ！ thanks for developing method!
However,I am currently experiencing an issue with accessing the smfish_3d and synth_3d models using the …
-
Hi,
To run on the data, `https://github.com/kharchenkolab/BaysorAnalysis/tree/master/data`, do you have instructions on how to run baysor on these samples? I am unable to reproduce the figures from…
-
Hello, recently I used the Giotto developed by you. I get a gitto object according to (https://rubd.github.io/Giotto_site/articles/mouse_merFISH_preoptic_region_200909.html ) website tutorial and inst…
-
Currently, we represent smFISH codebooks as follows:
```python
In [6]: smfish
Out[6]:
{
f…
-
Hello, the file smFISH__gene_key__new.tab is missing in get_sce_smFISH_genes. I can't find it on the website you provided. Can you provide it?
-
These assays are in CELLxGENE (some are still private) but not addressed yet by the Census schema as included or explicitly excluded
```
10x transcription profiling
SORT-seq
CEL-seq
in situ seque…
-
Right now we can generate smFISH and ISS codebooks, we should add the ability to add MERFISH codes as well.
-
> As an exFISH Developer, I want starfish to provide an example of the processing of a single field of view of exFISH data so that I can establish it matches analysis done with my own tools.
We ha…
-
I do not know why but sometime one .png layer does not load entirely or does display att all.
![Capture du 2021-02-12 08-07-33](https://user-images.githubusercontent.com/40570554/107741272-22284900-6…
tdefa updated
3 years ago
-
Hi!
Really cool package that's easy to use. I've already compared it to some prior selections using geneBasis and think I'd like to switch over. One of the things I'm I'd like to make sure I unders…