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Hi,
I am encountering "incomplete aux field" when I am looking to execute pipel subcommand. please see detailed error log here.
[MM] /production/BatMeth2-master/bin/memalign c2t -1 Bis-AG876_S…
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Hi, Soren,
Thank you for developing the tool. It is easy to install and I can run your test dataset successfully.
However, when I run my own fastq file with the corresponding f/F/r/R sequences, I …
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### Description of the bug
Error in the genome index step using both 2.3.0 or dev versions using the command below.
All reference files are from mirbase and fasta from Ensembl.
The test run worke…
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Hi guys,
I'll try to do my best for the pyDNA hackatron.
One thing I could bring relatively easily is some code for Golden Gate Assembly (based on any Type II2 enzyme).
In pyDNA Golden Gate c…
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First thank you very much for all the detailed explanations provided to run your programm. It's really great, especially for people who are just beginning programming.
I have successfully retrieved …
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Hi
I tried to run `idba_hybrid` in the following way:
```
$ fq2fa --paired out_mit.fq out_mit.fa
$ idba_hybrid --reference mit.fasta -l out_mit.fa -o `pwd`/idba-mit --num_threads 10 --pre_correction …
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Hi,
gemBS seems to be a very interesting toolkit. My wet lab colleagues use targeted approach - they amplify specific regions of bisulfite converted DNA and analyze it using amplicon sequening on I…
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This is something that tripped me up when I was getting started with BURST. BURST seems to let you build a database + accelerator from a gzipped Fasta file without an error, but the result is non-func…
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We would like ti import SO terms, but these currently do not align with Chebi's definition of DNA and RNA molecule.
Need new branch in EFO for SO terms and axiomatise these to either DNA o…
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General export options:
-for IDT plates, the default export puts the staples in wells by plate column (A1, B1, C1, etc). I go by row for my experimental purposes, and currently I must manually switch…