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Not protein coding, so no UniProt id.
Can look up author given id (or sequence?) at https://www.rnacentral.org/
PHI-base eg PHI:6247 BSR0441 Brucella melitensis
https://www.rnacentral.org/searc…
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Hi
I am running sailfish-cir using output generated by CIRI2. I noticed that some of the circular RNA transcripts which have been quantified by the tool have multiple values. What does this signify? …
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Count_tags out
featureCounts in
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Hi! Thanks for the cool tool!
When I start from estimated read counts from a different pipeline (STAR > featureCounts) should I provide Taiji with raw reads or should I normalise them somehow before …
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Hi,
I was wondering whether the sctransform normalisation is able to account for changes in RNA composition between conditions. I have a dataset of non-activated and TCR-activated T cells. I see …
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To determine how to package the results that we have into journal articles, it would be helpful to separately examine the behavioral and hormonal results for just the animals that had tissue included …
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Hi, sorry to bother you. When I run `pairCells()`, I got this error as follow:
```
pairing
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Hi,
I am trying to estimate the RNA velocities for a data set produced with the inDrops v2 sequencing protocol. For doing so, I'm starting with the fastq files downloaded from SRA. I've followed a…
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Need to check this (I.e other annotations), but I'm pretty sure that this is referring to TRAMP-exosome dependent pathway. However the current labels are problematic because MOST other unrelated RNA …
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Hi I have been trying to follow to tutorial of Integration and reference mapping with multigrate https://docs.scarches.org/en/latest/multigrate.html. However, I was having trouble loading the multiVAE…