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Can anyone help in resolving below error
Traceback (most recent call last):
File "C:\Users\sanjaysoni\Projects\Genome\env\lib\site-packages\feast\repo_config.py", line 353, in load_repo_config …
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Hi,
I wanted to know if you tested this tool with any other software than "syri".
I tried a ton of things to run syri, but did not succeed. It would be great if a less dramatic tool could do the …
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### Description of feature
Dear nf-core & pangenome team,
I have a few questions about your great program.
Based on the link (https://github.com/nf-core/pangenome/blob/1.0.0/modules/nf-core/w…
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### Description of the bug
I am new to nextlfow sarek pipeline, I tried to use docker as profile to test run the sarek pipeline but it had error. is this the docker issue ? how can I download back th…
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Funny little minor glitch. I think it's using the counter for "genomes passing animo acid filter" instead of the total. This leads to fun warnings like:
`[2024-04-25 14:25:09] WARNING: 2 of 1 genomes…
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Hi,
We have tried helixer on the Cupressus sempervirens genome assembly
https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_028749045.1/
but obtained poor busco results on the 38652 called transcrip…
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Hi @ctb the sourmash author,
Currently we are working on using your tool to find the representative MAGs within a customed data set assembled from several deeply sequenced stool shotgun samples. Th…
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Compared to the other variant types, SNP/indel variant calling is extremely slow. Is there a reason for this bottleneck?
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Thank you for developing such a useful program. This is my first time running RepeatModeler and I'm still working out how to use it to the fullest extent. I'm really glad that you have the "-recoverDi…
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Hi,i am running vcf2smc and get a WARNING :
`$ docker run --rm -v $PWD:/mnt terhorst/smcpp:latest vcf2smc -m Oc_genome.mask.bed.gz -d gaoqiao_14 gaoqiao_14 remove_multiple_POS-2.vcf.gz ./test/test.…