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Hi,
I was reading the documentation and open/closed issues but I cannot find if it is possible or not to get the counts of each detected AMR with AMRFinderPlus
Thanks a lot for your help,
Manuel
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Leave below as comments your memos that grapple with the topic of climate change, inspired by the readings (Synthesis report from IPCC5, IPCC Special Report: Global Warming of 1.5°C, Bill McKibben's “…
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If I install tidybulk without DESeq2 it throws an error, even if DESeq2 is just in the suggests, in the DESCRIPTION file.
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Hi! Thanks for a great package! It is very useful in my research!
I am following the tutorial; https://microbiome.github.io/OMA/differential-abundance.html, and aiming to run the comparison of the …
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Thank you for your research and publication on this kind of data,
I don't work with microbiome, but with single cell RNAseq data instead, and as the study designs grow in complexity and number of sam…
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If ASICs are going to be a recurring problem, can you change the POW to maybe 5 or 10 different options every block based on the hash value of the previous block? That way the software could be change…
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Hi Chi
maaslin2 as differential abundance methods
I was advised by a statistician to run GLM for differential abundance and a senior PhD student lately informed me about maaslin2 which is GLM ba…
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A
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I have a dataset that is 24 samples, 12 per treatment. I have aggregated my ASVs at the family level and there are approximately ~300 families. I have tried setting the minimum prevalence to 10% and 2…
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# Bug Report
Packages affected:
- [-] sdk
- [ ] etl
- [-] widget
- [ ] http-client
- [ ] http-server
- [x] spa (explorer)
- [ ] OWL/SHACL definitions
### Expected behavior
Docmaps av…
ships updated
10 months ago