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hi,how to resolve this problem ?
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Writing to output...
Primers combination number 1
Number of written amplicons: 272
Sorting amplicons to multiplexes 1_2 (…
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[Suggestion to add amplicon resequencing data-processing functionality, brief description of new scripts to aid in this, and request for guidance on unit testing or code review]
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## Justification …
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### Description of feature
Context in [this Tweet](https://twitter.com/nilshomer/status/1498528699670433795?s=20&t=1uKZpUz-ZkBQKuCobNvyGQ). Used by @peterk87 @fmaguire in [this pre-print](https://www…
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I was working on integrating automatic email-ing of workflow output files, and then I noticed my dashboard wasn't being updated anymore (when I run a workflow, it doesn't show up in tower dashboard **…
daudn updated
3 years ago
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I am struggling to completely understand the differences of the outputs in AA and AC and how to translate this to presenting the results of the analysis:
If I have an individual sample which appears …
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Hi, Thank you for providing this great tool! I am interested in calculating CpG entropy, and I am wondering how sequencing depth (such as comparing data with 10X coverage vs. 30X coverage) and CG cont…
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Hi,
I'm testing the pipeline and everything goes well until :
artic_plot_amplicon_depth --primerScheme /home/linux/programmes/artic-ncov2019/primer_schemes/ZaireEbola V1/ZaireEbola.scheme.bed --samp…
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We have examples where there is an amplicon with two right-hand primers. Neither primer is excluded at the primer/amplicon identification stage, and both are provided to cylon.
Observed behaviour: …
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Create:
* tables for the GTDB basis
* tables with association with the classification of OTUs and ASVs in the platform
* functions for classification of representative sequences for OTUs and ASVs (…