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## Short description of the problem
Using anvi-setup-scg-databases --scgs-taxonomy-data-dir doesn't work Installs to idiosyncratic /tmp file. It's not setting the -d parameter in diamond
## an…
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## Running anvi-split but cannot proceed because PROFILE-refined.db does not seem to have a table named `variability_splits
## anvi'o version
Anvi'o .......................................: mari…
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Dear Peakhood team,
I tryed to use peakhood on eCLIP data on a cytoplasmid RBP, but it crashes at the first step, it seems it is not able to open the .2bit file:
`Traceback (most recent call last)…
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Hi there
I am actually not sure if this is an error or just a warning. I reinstalled Virsorter using the conda virtual environment instructions. Everything looks fine and seems to run fin but after…
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Good day.
I am very new to bioinformatics. Please can you help. I am trying to run this command :
#!/bin/bash
#PBS -l nodes=1:ppn=24
#PBS -l walltime=720:00:00
#PBS -q bigmem
#PBS -o /nlust…
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Hi,
When running the "lc" part of your software, I got this error :
```
____________________________________________________
Calculating 4mer frequencies for
…
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## Short description of the problem
Pretty much issue #2010 (closed), which was supposedly solved. `anvi-setups-scgs-taxonomy` writes to default location even with `--scgs-taxonomy-data-dir`.
I'…
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I am having an issue with "refinem outliers" where I'm getting an error: "invalid value encountered in double_scalars." This originally happened in v0.0.22 but after looking at the github issues pages…
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## Short description of the problem
Hello Anvio team!
I am trying to use anvio for automated bin refinement (which is generated outside anvio). I created contig db for each bin and profile db (u…
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## Short description of the problem
Greetings everyone, Meren asked to use this channel to discuss this topic from the discord server "https://discord.com/channels/1002537821212512296/1263173335479…