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I'm seeing runs with truncated bam/log files. The version is 0.5.1 and the command being run is:
dorado duplex --verbose sup,5mC_5hmC,6mA xad.pod5 > xad.bam 2> xad.log &
[2023-12-29 07:46:27.334…
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resulta que soy exaltado ocn mi hermandad y mi hermandad es de nivel 25 y no puedo comprar la montura de riendas del rey dorado mi pj se llama crow
![wowscrnshot_051213_170641](https://f.cloud.github.…
kiiit updated
11 years ago
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Hello! I'm trying to run `eventalign` for a dataset of small oligonucleotides of size 100nt, but most of the reads fail with either "no alignment" or "not calibrated".
This is the command that I ex…
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## New feature
It would be extremely useful if GPU usage metrics were recorded for GPU tasks.
## Usage scenario
Using GPU resources efficiently on HPC is often a challenge. For example, basec…
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# Issue Report
## Please describe the issue:
Get the following error when trying to get Dorado working on a Jetson AGX.
```
[ont/warning] dorado logger: Caught Torch error 'CUDA error: no kern…
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* https://github.com/nanoporetech/dorado
The license is a bit quirky but it seems to be academic free?
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# Issue Report
## Please describe the issue:
When running basecalling with v0.7.1 and v0.7.2 the basecalling crashes with the following error message after around 30 minutes to 1 hour:
![Screen…
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Hi,
I was just processing a bunch of reads with dorado trim (0.7.3) and noticed that it keeps saying:
`[info] > Simplex reads basecalled: 456331`
And if I turn verbose on:
```
[debug] Total…
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Hi all,
I'm a little confused about what gets trimmed when and what doesn't.
As far as I understand `dorado basecaller` trims adapter and barcode if demultiplexing is turned on.
My workflow …
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Dear developpers
As already discussed in [issue 621](https://github.com/nanoporetech/dorado/issues/621), a progress bar only visible interactively (outside a log file), is not very useful when you …