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Thanks for providing this so useful tool!
I'm wandering if it's possible to build a metabolic network from a list of EC number?
Best Regards,
Pandeng
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Create a new association class `reaction to participant association`
The fields would be:
- subject (https://w3id.org/biolink/vocab/MolecularActivity)
- predicate: (todo: add has-participant …
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**Describe the bug**
ProgressReportNumber in the Milestone Tracker is not showing milestones 3 and above for some studies.
**To Reproduce**
Steps to reproduce the behavior:
1. Go to projectLive-…
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### **Microbes as Biosensors**
Maria Eugenia Inda and Timothy K. Lu
_https://doi.org/10.1146/annurev-micro-022620-081059_
this is a super good overview!
**Key parts of engineered sense-co…
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Dear Francisco,
Recently, I have tried to use your pipeline to analyse some metagenome data. For the bin, i found I can only get about 30 MAGs of high quality (completeness > 90% by checkM). So I am …
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As one can see for the following Item, Senior Theses Items imported from submissions for certificate programs are members of multiple collections, one being the departmental collection, the other bein…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/saezlab/cosmosR
Confirm the following by editing …
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### Background
The BIMIB and the SYSBIO groups at the Universita` degli Studi di Milano-Bicocca have constructed a series of algorithms and tools to study the Metabolic Rewiring of Cancer cells. T…
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Nice to meet you, Lianmin Chen.
I am a student in Fudan University and new to microbiological network inference. I have read the paper [Gut microbial co-abundance networks show specificity in infla…
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Dear GapSeq developers,
Thank you for the development of such an interesting source. I have installed it and everything went fine. I tried to run `./gapseq doall toy/myb71.fna.gz ` and I got the foll…