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Hi - this is from Magdalen Lindeberg from PAMGO:
I am writing to you regarding "InterPro: IPR004268 Virulence factor MVIN-like" which appears to be both incorrectly named and GO annotated.
A recent …
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peptidoglycan synthetase activity GO:0008954
This should be made obsolete because it is ambiguous, and has been used to annotate gene products with very different activities. 'Consider' terms:
pepti…
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There are a number of interpro domains ampping to cell wall processes from higher eukaryotes
I'm not sure whaich specific child terms they are attached to, but I'm seeing them annotated to the term
…
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add cell wall organization and biogenesis
Reported by: ValWood
Original Ticket: "geneontology/ontology-requests/4412":https://sourceforge.net/p/geneontology/ontology-requests/4412
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I sent this to the list.
Hi,
I've noticed that in the ontology file there are
verious different dbxrefs
refering to the same people, and also some differences
in format of dbxrefs. I wondered if it …
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Actinobacteria have two layers on top of the peptidoglycan-based cell wall. Understanding "GO:0009273 peptidoglycan-based cell wall biogenesis" to be applicable to them, two new specializations (PART_…
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Hi,
Didn't know if this should be 1 or 3 requests... All are children of GO:0033112, see 18976493 for some of these terms' usage.
Cyanelle inner membrane;
The inner membrane of a cyanelle is the me…
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I'd like the new terms:
Imd signaling pathway
regulation of Imd signaling pathway
positive regulation of Imd signaling pathway
negative regulation of Imd signaling pathway
Imd is neither the signal…
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there is a term "organic substance transport"
presumably its sibling terms
peptide transport
organic acid transport
protein transport
organic alcohol transport
hormone transport
eye pigment precursor…
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disjointness_violation:
GO:0051672-cell wall peptidoglycan catabolic process in another organism
is both cellular and MOP, through it's is_a parentage to
GO:0016998-cell wall catabolic proces…