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**Desktop (please complete the following information):**
- OS: Linux Mint 20
- CellProfiler Version 4.1.3
- Installed from pip according to official Ubuntu 20 instructions ( https://github.com/C…
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Hi Eric,
I have started to see the following error with regard the MySQL database
![image](https://user-images.githubusercontent.com/17010046/73283761-9905a900-41c1-11ea-9553-ece6a712e594.png)
…
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From http://forum.cellprofiler.org/t/table--link-tables--already-exists-error/4126
Greetings to all;
Using CPA v2.2.1 with MySQL, I'm experiencing the following series of errors.
Before link ta…
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See https://forum.image.sc/t/how-to-use-cellprofiler-per-image-results-from-plate-analyses-as-source-for-omero-parade/59894/4
"while switching between the plot and the table view, the plot settings…
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The workers will retry indefinitely to re-process files. Need a dead letter queue.
The clue is to look at the file sizes, e.g. this file is much bigger than the others:
'/mnt/mikro-testdata/source…
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@d33bs - consider applying pycytominer-transform to the existing SQLite data here to test your approach with real world data.
We would be particularly interested in comparing the results from `pycy…
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We should be able to use `infer_cp_features()` to identify patterns beyond compartment. We might want to use `infer_cp_features()` to subset by CellProfiler feature group, e.g. `Cells_RadialDistributi…
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Hello, I am trying to convert an `nd2` file containing several field of views with 6 channels each and a variable amount of slides (it is quite big, around 18 GB).
When I read the metadata and get th…
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For our notes, there are two alternate paths that either replicate cytominer-database functionality or obviate its need
1. @gwaygenomics works directly with CSVs in pooled Cell Painting experiments…
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hello. I'm nix(nix-darwin) user.
mac intel sonoma, python 3.10
The build log is as follows:
`
Sourcing python-remove-tests-dir-hook
Sourcing python-catch-conflicts-hook.sh
Sourcing python-re…