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https://trinotate.github.io
- [ ] upgrade signalp wrapper to 4.0 hg clone https://toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp
- [ ] Upgrade transdecoder wrapper to 3.0
https://github.com/…
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Idea spawned here: https://github.com/galaxyproject/galaxy/pull/617
Let's put together a list of these first:
- ~https://github.com/galaxyproject/galaxy/blob/dev/doc/patch.py~
- https://github.co…
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We discovered, that fastq files downloaded from NCBI SRA via fasterq_dump are different to the ENA stored fastq files. After some digging, this is probably due to the `--clip` option.
Example downl…
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In this issue I will assume the option in planemo to serve/test/run with a Dockerized Galaxy instead of a local Galaxy is in place (https://github.com/galaxyproject/planemo/issues/15 is WIP) and track…
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Hi,
I am working on a Galaxy wrapper for LIONS.
Find the PR here https://github.com/galaxyproject/tools-iuc/pull/2969
Can you provide a small (< 1MB) test dataset?
Thanks in advance and st…
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Hi Galaxy-Hub Team,
The Galaxy Event page is listed in the live-deploys page https://bioschemas.org/developer/liveDeploys#nav-site
(go down to "Galaxy Project", expand the details, and see the li…
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See https://github.com/galaxyproject/galaxy/issues/4084.
I dislike the idea of using an admin api key for this. Provisioning should be run by a non-priviledged user, not by an omnipotent one.
Also, …
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Since 18th of January workflow testing seems to fail for all. Checked a few, all had "Missing argument "HISTORY_ID"
e.g. https://build.galaxyproject.eu/job/usegalaxy-eu/job/workflow-testing/PYTHON=…
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https://github.com/galaxyproject/galaxy/issues/3030
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Example for k8s: https://github.com/galaxyproject/pulsar/commit/f892f712b5bf964d220f513c98b51f4c69168e15