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Hey Jeremy, in #238 you mentioned:
> However, Neuroglancer currently only supports that if the dimension is unchunked, i.e. the chunk size is equal to the full extent of the dimension; for your exa…
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There have been several discussions around where to put the various information that's been developed during the [OME Zarr Spike](https://github.com/orgs/ome/projects/8). Several new repositories like…
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- **Issue**: Trying to drag-n-drop Iterseg-written labels files (from segment_data widget) into napari using the iterseg reader fails.
- **Error trace**: Traceback begins with `MultipleReaderError` …
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I'm working on saving a dataset that contains multiple segmentations per image (manual segmentations by different people). Trying stuff out, I'm having three related issues:
- [ ] the labels layer …
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@joshmoore @will-moore
```
OMEZarrS3Reader reader = new OMEZarrS3Reader( "https://s3.embl.de", "us-west-2", "i2k-2020" );
SpimData em = reader.read( "em-raw.ome.zarr" );
SpimData myosin = …
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Test suite status: failure see https://github.com/ome/ome_zarr_test_suite/actions/runs/7802647226
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I just tried validating a local file, and the tool didn't seem to work - the link I used was https://ome.github.io/ome-ngff-validator/?source=file:///Users/dstansby/notebooks/ct-scans/david_ct_scan.za…
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In the following code, the type hint for `version` is `str`. Yet, the code has been modified to handle floats too (#189).
Should the type hint be changed from `str` to `str | float`?
https://git…
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As part of #557, I added a small test that fetches data from https://www.ebi.ac.uk/biostudies/bioimages/studies/S-BIAD843, runs `import_ome_zarr`, and checks some aspect of the new image ROI table -- …
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BIDS accepts ome-zarr data in its microscopy extension, but not in its main MRI-related specification.
In most cases, MRI volumes are small enough that chunked formats do not make sense, but MRIs…