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Currently the indexing constants when using elastic search use the dot notatation in the name :
![image](https://github.com/OrchardCMS/OrchardCore/assets/1516981/9ef39790-a9a1-4c8e-b817-63e58803…
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Hi,
I'm trying to apply strainberry to my nanopore data obtained from the sequencing of a bacteriophage culture.
metaFlye generated a single contig of ~80 kbp from the nanopore data. But, based …
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For example: https://github.com/vgteam/vg#mapping
```
If your graph is large, you want to use vg index to store the graph and vg map to align reads. vg map implements a kmer based seed and extend ali…
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I like to combine different metagenome-assembled genomes (contigs) into one.
I tried to use miniasmwith:
```
cat all_genomes/*.fasta > x.fasta
minimap2 -x asm10 -t4 x.fasta x.fasta | gzip -…
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We have already used metaGEM to assemble MAGs from ancient samples, e.g. [see zenodo repo](https://zenodo.org/record/7414438#.Y7l_CoLP3wc) & [github issue](https://github.com/kosticlab/ancient-microbi…
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RTAX currently appears to have a memory cap at ~4GB and the qiime wrapper runs indefinitely without outputting an error message.
e.g., the following command runs indefinitely without error output:
>…
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### Discussed in https://github.com/wwood/CoverM/discussions/120
Originally posted by **kevinmyers** June 28, 2022
I have a set of 217 MAGs that I would like to use coverM to determine the ove…
wwood updated
2 years ago
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## Is your feature request related to a problem? Please describe
At the moment there is an input option to use only [short reads](https://nf-co.re/mag/usage#direct-fastq-input-short-reads-only).
…
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I’m working on using STAR to map my transcript reads to the tetraploid wheat genome. I’m getting some errors I don’t understand.
I am currently using the usegalaxy server as my university server is…
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can the use of long genomic reads improve the accuracy ?
tnx !!