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Hi Tod,
I've been trying the nanopore support of vSNP3 and I think it still needs to be optimized.
First, when installing vSNP3 with conda, it lacks 2 dependencies: vcftools and bcftools. To ge…
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Dear translators,
A new English version of the Bioconductor Code of Conduct has been created (version X.X.X).
We kindly ask you to check those latest changes, and update the translation of the lan…
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Currently, yass runs with only single threads, and is slow for large fasta files.
Is it possible to speed up yass by running parallelly on more threads?
Thanks.
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Hi philippdre,
executing run_omniclip using the parsed background and CLIP files gives me an TypeError (see below).
But I think i'm probably loosing my way already during the setup process. Aft…
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For paper highlight in publication page
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Dear All,
I'm running STAR-Fusion with this option: --chimOutType WithinBAM , and it gives the following error:
Error, don't understand arguments: [--chimOutType WithinBAM] at /usr/local/bioinfo/…
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Can you please create a release (and thus a stable url to a tarball) so that I can try to add `PopCOGenT` to bioconda. See the [bioconda docs](https://bioconda.github.io/contributor/guidelines.html) i…
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I'm not sure what to make of this error. Please advise.
```
Found an unusual minimum quality char of 39 ('). Stopping now. Use option -m to overrideTraceback (most recent call last):
File "/scr…
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Hi,
There is something I am not sure to understand for the config file regarding the busco part.
It is possible to precise lineage and basal lineage.
My understanding was that in lineage I should…
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Dear Aurelien, Attila,
Excellent bioinfo tool, congratulations!
I have two questions concerning to the metabolite annotation in the PKN
1/ Looking the full PKN network, I have realized that m…