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Hi all,
what about incorporating multiple primer set from a multiplex approach (i.e. different genes/regions)?
Activating conda environment: /home/minion/git/dadasnake/conda/cb1403239da0c2b661e…
a-h-b updated
2 years ago
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We have recent Shoreline data that (having been demultiplexed through SBAnalyzer) appear to be in mixed orientation. This is partially dealt with when classifying reads when using `assignTaxonomy` in …
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**Bug Description**
I have recently installed an Illumina iSeq-100 benchtop sequencer in my lab, and it was announced allready in 2018, that there will be a 2x 250 bp sequencing cartrige available so…
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Hello,
I would like to use the pipeline for analysys very short amplicons (from 250 to 500 bp) . Do you think that could be possible with this pipeline?
I've tried to used, I installed all the …
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**Describe the bug**
ERROR: list index out of range. This has never happened to me before. The files that I am performing the analysis on are new.
**Expected behavior**
Not ERROR: list index…
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At one locus in this dataset I see that iVar is soft-clipping all the bases except 1 when that base is next to an insertion and mismatches the reference.
I've also included illumina data from the sam…
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Hi guys,
Thanks for the good work,
Using a cluster computer, I was downloading your databases the full version and it stopped at step 14
2021-10-30 20:29:18,929 [INFO]: Step 14
2021-10-30 20:…
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The machine learning classifiers used for taxonomic assignment usually assume that all taxonomies are equally likely (eg. Wang, 2007). That assumption can be relaxed for `q2-feature-classifier`.
To…
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Hi, I got an error while installing the nifh-ASV-workflow. The error messages are as follow:
`Preparing transaction: done …
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HI,
I tried running your script following the readme file for Brucella. It gets to the end of strain 43 and then it comes up with an error:
Traceback (most recent call last):
File "/PATH_TO/MLV…