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Hello,
When I build the environment using the environment.yml provided I get the following error:
AttributeError: module 'tensorboard' has no attribute 'lazy'
Any advice on how to fix this?
…
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### Description of feature
Hello rnavar devs,
This is a feature request as well as an ask for assistance, if possible.
Essentially, I would like to add a small step in the pipeline, right bef…
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## About
Add a new summarization tool: Bandage. This tool is not installed on Biowulf; however, this looks like a GUI-driven application. We need to get more clarity on how it is going to be used. Ar…
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### Operating System
Ubuntu 22.04
### Other Linux
_No response_
### Workflow Version
v0.5.1
### Workflow Execution
Command line
### EPI2ME Version
_No response_
### CLI command run
_No resp…
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### Description of the bug
When I attempt to run `nf-core/mag`, the script, immediately after startup, errors with the following unusual output:
```
Is a directory
-- Check script '/ref/djs…
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Dear Pipeliner developers,
I want to express my gratitude for developing this helpful pipeline. I have been trying to run the exome pipeline on a cohort on Biowulf, but I encountered an issue where…
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### Description of the bug
Hi - first time nextflow and circdna user. I am trying to run circdna on a tumor BAM file that has already been processed. I followed the instructions in the README and enc…
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Problem:
Marco ran a dataset that errored due to max memory
STAR's p…
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Sample
```
SJ030702/SJHM030702_D2 ngs_pipeline_SJ030702=SJHM030702_D2=20220911
```
Error files
```
/data/khanlab2/processed_DATA/ngs_pipeline_SJ030702=SJHM030702_D2=20220911_20221220_005927.lo…
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### What happened?
I got the following error. Any help is appreciated.
Error executing process > 'sv:runReport:report'
Caused by:
Process `sv:runReport:report` terminated with an error exit …