-
Prepare user for which date must be prepared before creating a project.
Checklist should be part of add page
-
**Submitting author:** @standage (Daniel S. Standage)
**Repository:** https://github.com/dib-lab/khmer
**Version:** v2.1
**Editor:** @biorelated
**Reviewer:** @sjackman
**Archive:** 10.5281/zenod…
-
Hi Sam, I'm trying to test your pipeline on my 16S ONT data.
I'm facing an error and I don't know why. Here is the log file:
Wildcard constraints in inputs are ignored.
Wildcard constraints in…
-
Hello, I have a short question about the interpretation/meaning of the GRiD values. The publication states that GRiD stands for Growth Rate Index, but there is no explicit mention of the units of this…
-
Hi,
I have binned genomes from 6 metagenomes using metabat2 and maxbin2 and chosen the latter based on better completion / contamination results. I want to use ssu_finder to identify who these geno…
-
Hi there,
I was wondering about your thoughts on how useful it would be to include here some taxonomic information independent or dependent on the metagenome assembly. I would enjoy having a pipeli…
-
Hi,
firstly, thanks for introducing such great tool for identifying snps in isolates.
I am trying to use the metagenomes-assembled genome (>300 coverage) to map back to the original reads, but th…
-
In future versions, are there plans to set an option to input custom translation tables?
Possibly in the format of:
```
1. The Standard Code (transl_table=1)
By default all transl_table in…
-
-
Hello, I have an error, and not sure how to prevent it, or if this is an issue with the software itself.
Using canu version 1.8 on Ubuntu 16.04.6 LTS (no virtual machine).
```
$ canu --version
…