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I have been trying to assemble a 10Mb genome with uncorrected nanopore data (3-4 chromosomes expected). We have a lot of data, is that the reason Flye fails at the end?
[2019-06-22 11:00:05] INFO: …
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Preferred Term: long-read RNA sequencing assay
Synonyms: long-read RNA-seq
Definition: An assay that determines the sequence of an RNA molecule using single-molecule technologies to allow longer rea…
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Hi,
Can we use NextPolish2 to polish the assembly generated by Oxford nanopore reads? Or is it only applicable for HiFi reads?
Thanks
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Can TGS reads, which are originally in FASTQ format generated from ONT (Oxford Nanopore Technologies) or HiFi (PacBio HiFi) sequencing, be converted to FASTA format and used as input for further analy…
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This is a feature request for FCS-adaptor (and FCS-GX).
I understand how `ACTION_TRIM` and `FIX` can be set manually in the `fcs_adaptor_report.txt` to trim contaminant ends or split/mask internal …
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### Ask away!
Hi @SamStudio8.
I am reaching out to you in hopes of figuring out a peculiar issue regarding Oxford nanopore downstream analysis –
Eli Lilly owns a handful of sequencers from Ox…
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The field will be used to specify the sequencing platform applicable for the application.
It will be located next to the field "prep category".
"Platform" needs a drop down list with the following…
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Distribution for v1.12.0 on Bioconda please! My data were basecalled with 0.7.0...
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Hi
This is not a bug, but a question.
I'm in the search for a software that can help me build a HMM that can identify imprinted regions using data produced with dorado and modkit from Oxford Nan…
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Thank you for your tool. I have found Purple to give accurate results for most samples I have tested it on.
I have a sample that I am able to run Purple on successfully without using somatic SNVs, …