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### issue: Verification of BALSAMIC v11.2.0
New release of BALSAMIC v11.2.0
Added:
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Changed:
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Fixed:
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* Adjusted bcftools somatic filter command to fix an …
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/Pitithat-pu/cfdnakit
Confirm the following by edi…
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Dear All,
I am trying to visualize ome.zarr file in napari on Windows 10.
I converted a dataset to zarr from the https://camelyon17.grand-challenge.org/Data/
I downloaded it using the followi…
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**Task**
Script run on 7-10-2022
Curate the projects in this ticket following the instructions in the [SOP](https://ebi-ait.github.io/hca-ebi-wrangler-central/SOPs/dataset_acknowledgement_SOP.html#man…
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# 🆘
#### Please describe your issue in a couple of sentences and provide a link to the relevant pedcbio project of interest, if it already exists
There is an 18 sample difference (aside from new sa…
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**Describe the issue**
When I run PureCN on 10 tumor samples and use their paired 10 germline samples to create a reference, I get different cellularity and ploidy results from Sequenza. Moreover, I …
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https://mp.weixin.qq.com/s/XvEh0iws4_g6g3JkBykDQA
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Hi,
I was wondering if it is possible to load a BAM file from a Google Cloud bucket. I tried loading a public BAM (example code with only the BAM location replaced) and that didn't seem to work. I …
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Hi
Likely I have a lot of NAs in my TCR
`quantContig(combined, cloneCall="gene+nt", scale = T)`
![Rplot](https://user-images.githubusercontent.com/43682980/167117304-9496604e-b555-4bcd-98a2-87…