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https://www.youtube.com/watch?v=fCd6B5HRaZ8
https://www.youtube.com/watch?v=-7GK1HXwCtE&list=PLnzAhaRtwW9cpQjk7IMj6gGq7UMPOKuq9&index=1
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Hi Sai:
Thanks for sharing these scripts.
I did some tests with the SHARE-seq technique, which selected the illuminat 300cycles sequencing strategy, and everything else was bas…
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@willbradshaw I didn't see an issue for this, though you noted it in the code itself:
```
# NB: Current paired version can't distinguish or annotate forward vs reverse reads in these plots.
# TOD…
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cc @turbomam
If we need to represent Illumina NovaSeq 6000 S4, I assume we would create a subclass of
id: OBI:0400043
name: flow cell
def: "Aparatus in the fluidic subsystem where the sheath…
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Our config includes a `chmodcommand` entry that allows us to control the permssions on the uploaded files:
https://github.com/BCCDC-PHL/illumina-uploader/blob/ecde03269464c9aec99f4fe70e3cfd62a4a2ed…
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### Description of feature
It would be nice if metadata regarding the sequencing run was displayed in the reports. In the case of an Illumina run this could include:
- Control software version
-…
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Dear all,
I have Illumina data (150 *2 bp), in total, 110 Gb. I cleaned it with Trimmomatics. I used Genomescope to estimate the genome size with kmer = 21. The estimated genome size is about …
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### Description of feature
Hi,
Illumina has introduced a new read compression format, ORA: https://www.illumina.com/science/genomics-research/articles/design-ora-lossless-genomic-compression.htm…
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Hi Matthias,
I seem to have successfully installed multiqc_sav, as the list of plugins after installation includes SAV, but when I run
`multiqc -m SAV .`
in folders containing
```
InterO…
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Hi
Thanks for a great method.
I'm working on chromosome contact data generated from a long read sequencing method. Check link here if interested:
https://www.biorxiv.org/content/10.1101/833590v1…