-
Hi Zhichao,
Sometimes /METABOLIC/METABOLIC_template_and_database/**MW-score_reaction_table.txt** does not include all hmm models that present in the **METABOLIC_result.xlsx**.
For example, in MW…
-
**Summary !!!**
- **BioModel Name**: Jiménez-Luna2021 - Coloring molecules for interaction with CYP3A4
- **BioModel Tag**: Machine learning model, Ersilia
- **Metadata Comments**:
The model…
-
Notes for the meeting with Dr. Mcpharland.
-
= Description =
- Provide metabolic engineering tools in !BioPreDyn API.
= Context =
- !BioPreDyn mainly deals about manipulating biological models and simulations through the Simulation Experiment D…
-
Good morning!
I am trying to use your scripts (adapting them to python3.6) for my metabolic models created by carveme (https://github.com/cdanielmachado/carveme) instead of ModelSEED so starting fro…
-
Hi,
I am running the 'summarize-markers' as
```
summarize-metabolism --input aquifer-genomes/ --output summary --metadata groups.csv
```
but I am getting the following error:
```
##############…
-
# Description of the issue
I have been trying to access the published article that features the metabolic model iJN1463 of P. putida KT2440 but there is no link. Could this be updated?
# Page
…
wnkc updated
6 months ago
-
The following list of tests sometimes contains `None` or `nan` values in the `"data"` key. This points to exceptions occurring in the code that we are not properly handling (or really messed up models…
-
-Under Widget 1: "You can check this file by going to the CaseStudy1 folder and opening the **corrsFlat.txt** file in any text editor. Here is what the header and first five **lines of dat this fil…
-
Tasks so far.
Start with R-HSA-163765 "ChREBP activates metabolic gene expression"
- [x] check charge and mass balance for alignment with RHEA
- [x] edit molecular events to make them GO-CAM compli…