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Hi Deep Sea group,
I am very excited to see this repo for deep sea microbial ecology! Couple quick comments/questions:
1. I spoke to Pier a couple months ago about potential interest in using https:/…
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I'am very interest in the microtrait R package because the reviewers required me to calculate microbial adaptation traits based on metagenome assembled genomes. Because this package integrated many bi…
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Turnbaugh, P. J.
Ridaura, V. K.
Faith, J. J.
Rey, F. E.
Knight, R.
Gordon, J. I.
2009.
The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice
http://dx.d…
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TO DO list
- [ ] check wiki for timeline of next activities
- [x] Morgan: ask ESA what our budget is
- [x] Morgan email and ask when the website will be moved
- [ ] Each add five data sets to our …
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Or our synthetic control data suggests read numbers after PCR are only semi-quantifiable as proxies for abundance in the sample, and for our tree nursery reporting we use only presence/absence. Will w…
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Use this issue to accumulate citations of paper that are relevant to the project. Cite papers in the following format:
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APA citation, ending with DOI.
Brief summary.
Reaso…
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Dear authors,
I really like your packages, and have used it to analysis my data.
I would like to recommend two models, which both are derived from transition state theory. Perhaps you could con…
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The issue #433 has received request (from @johannesbjork) to add robust matrix completion in the robust CLR (rclr) method in the _vegan::decostand_ function, following the procedure in [Martino et al.…
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Hello classifier team,
I'm interested to use copy number utility from RDP classifier. I've following as my query:
1- The documentation mentions to provide copy number files with flag -c. However, in -…
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This might be a poor exercise but I'm trying to understand the methods of paper and if it makes sense to adapt my linear-based workflow with PCA to non-linear manifold methods; thought trying out diff…