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We have four files that we want to roll back to the last "good" source, as represented in the last release.
- [ ] tair: many issues, should be fixed week of May 1st
- [ ] mgi (see https://github.c…
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Please provide as much information as you can:
~"cell integrity signalling" OR "cell integrity pathway"
(102 PubMed results)
The series of molecular signals regulates multiple biological pr…
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Dear all,
The proposal has been made to obsolete GO:0030685 nucleolar preribosome
see https://github.com/geneontology/go-ontology/issues/24626
Experimental annotations that need to be reviewe…
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So this is the "killer app" for annotation extensions. It will enable us to build networks.
EsyN is great for network building, but we only really need to connect nodes with edges (with better lab…
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It has been on my list to recurate this.
Snezka curated for japonicusDB, and I didn't check it but I wonder if we can use some of the metabolomics to convert inferred TCA and glycolysis enzymes to…
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Once
https://github.com/japonicusdb/japonicus-curation/issues/57
is finished.
I'd like to import the IEAs directly from GOA rather than the roundtrip through PomBase.
Is there a way that we…
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We've noticed this the last few times we've committed the PomBase GAF to GO: the gene_association.pombase.inf.gaf file produced by the Jenkins job has far fewer inferred annotations than the equivalen…
mah11 updated
4 months ago
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See also:
- pombase/pombase-chado#840
- https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.2001414
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serine-type endopeptidase activity modified residue S371
IN this one S371 is an active site residue so just "residue". It might look a bit weird because an active site is more than o…
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stats: https://docs.google.com/spreadsheets/d/1Dezju_HWwnPepAcQ2bkiDt05a9Y7JQNbp6dsPgZ5dto/edit?gid=0#gid=0
Noting that pombase and dictybase are now reverted to their original sources. >> looks go…