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Hello,
How can I extract the intensities of fragments?
Best,
Ronnie
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for this case :
```
(declare-fun arr () (Array Int Int))
(assert (forall ((x Int)) (=> (and (>= x 0) (< x 100)) (>= (select arr x) 0))))
(check-sat)
cvc5 test.smt2
unknown
z3 test.smt2
sa…
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### Description of feature
There are many other kind of smRNA in smRNAseq data besides miRNA, some people will trough them away, but some other will use it to investigate new hot-spots in the genomes…
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* split off from #172
## Record Functions
Should be able to identify certain type variables in record functions. For example:
```
# implicit type form (matching var from sig) (disallow?)
f1…
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### Description of feature
Dear Developers,
Can you please point me to the documentation that describes how to run the Genome Quantification using the pipeline,
Best,
Nico
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Dear findmycells developers,
we are having issues with the GUI based jupyter notebook application of findmycells.
We are testing the gui using the cfos dummy data provided. All steps from prepr…
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Hello,
Thanks for the great package. I have a phosphopeptide enrichment dataset. I am wondering how I can convert the diann_output.tsv to a table of phosphosites and their associated intensities.
…
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I am using the FragPipe software for database searches, and the output file combined_ion.tsv is used for quantification with directLFQ. I plan to perform differential expression analysis using DEqMS, …
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I am getting the above error even though the region is present in my data. What could be wrong?
```bash
./LDBlockShow-1.40/bin/LDBlockShow -InVCF haplotype_gene_quantification/g3_variants/haptags_…
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Hi,
Thanks for providing this tool, I'm using it, and it is very fast and flexible in usage.
I wanted to ask you if you think would be possible to use it for functional annotation and quantificat…