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BGI-shenzhen
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LDBlockShow
LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
MIT License
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Blank png files
#45
SquRunner
opened
20 hours ago
5
InPut Para -Region chromosome [contig] can't be found in the SNP dataset
#44
Jokendo-collab
opened
1 week ago
3
Can't find the [ convert ] bin in your $PATH, I try to convert svg by /home/Lingchenjin/LDBlookshow/LDBlockShow/bin/svg_kit/svg2xxx.pl
#43
8ling88
opened
2 months ago
1
plink无法使用
#42
f-c-f
opened
2 months ago
7
About the size of the labels x and y axis
#41
pbreeder
opened
5 months ago
1
Some sites were deleted
#40
tydcg
opened
5 months ago
3
Color options
#39
elissaralam
closed
18 hours ago
1
8547 segmentation fault
#38
haduong136
closed
18 hours ago
1
how to solve this error
#37
wangshuang2024
closed
18 hours ago
10
Haplotype blocks from whole chromosome
#36
mixle18
opened
8 months ago
1
inclusion of 'D raw' calculation
#35
JRodrigoF
opened
10 months ago
0
chromosome region can't be found in the input dataset
#34
TZM9882
closed
1 year ago
2
Error
#33
Jcakon
closed
1 year ago
1
请问如何才能显示正确的gene名称
#32
sheshen22
closed
8 months ago
1
Segmentation fault
#31
sheshen22
closed
8 months ago
6
Specific SNPS?
#30
andrewjordank
closed
1 year ago
7
BEGIN failed--compilation aborted at /bin/ShowLDSVG line 24.
#29
icc317
closed
1 year ago
5
non-human genome
#28
chengroup
closed
8 months ago
7
comparing D' scores of PLINK and LDBlockShow
#27
mennodejong1986
closed
18 hours ago
1
Error: Line 28 of .vcf file has a GT half-call.
#26
Sour01
closed
8 months ago
1
How can I close the quality check on my data?
#25
janking1
closed
8 months ago
3
Segmentation fault (core dumped) LDBlockShow
#24
carolhuaxia
closed
2 years ago
1
`ZLIB_1.2.9' not found
#23
janking1
closed
2 years ago
3
Why it went wrong?
#22
janking1
closed
2 years ago
3
Dose this tool need phenotypes?
#21
Alice-yyt
closed
8 months ago
1
I used LDBlockShow to analysis my vcf file. But I can't get any output.
#20
GuLinLin-JMU
closed
2 years ago
3
Parameter -Region (format chr:start:end) always incur warnings: can't be found in the SNP dataset
#19
pwu4
closed
2 years ago
2
clarify snp comparisons in triangle
#18
Apis-DeLorian
closed
2 years ago
2
.vcf file has a GT half-call.
#17
PengJia6
closed
18 hours ago
3
-NoLogP not working
#16
huw143
closed
2 years ago
1
multithread option?
#15
wbsimey
closed
2 years ago
3
Overlapping SNP name
#14
huw143
closed
2 years ago
1
Increase the resolution
#13
huw143
closed
2 years ago
1
gwas.pvalue
#12
Tigeeeeer
closed
2 years ago
2
LD - across all chroms
#11
siv-n
opened
3 years ago
1
argument "" isn't numeric in log AND can't take log of 0
#10
lee123lee
closed
3 years ago
5
SVG size can not be adjusted, I got a partial SVG
#9
huw143
closed
3 years ago
3
gwas.pvalue format
#8
huw143
closed
3 years ago
3
SNP number is not correct
#7
huw143
closed
3 years ago
5
Use of uninitialized value in subtraction
#6
KajBro
closed
3 years ago
12
Argument "" isn't numeric in log at /LDBlockShow/bin//ShowLDSVG line 999
#5
frucelee
closed
3 years ago
1
Too large svg graph to convert the format
#4
Yung-Chien
closed
3 years ago
12
I have problem to use the software in linux
#3
lrj-1
closed
3 years ago
4
Error: Multiple instances of '_' in sample ID
#2
sandipmkale
closed
3 years ago
1
availability on bioconda
#1
tomkinsc
opened
4 years ago
5