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Hi,
Thanks for developing `wgatools`, it looks very promising.
I am particularly interested in visualizing some `.maf` files that I generated by progressive alignment with `cactus`, and then c…
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Having issues in visualization of plot on internet explorer after the run is completed. I am using the gene bank files generated by RAST server and using four plasmid sequence for comparison. In the …
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Potential readings to focus understanding on probability, mathematical statistics, algorithms, etc more deeply. Talk of applications will be secondary.
- [Statistical modeling: the two cultures](ht…
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```
Hey guys!
Thanks for the great work so far.
It is really good to see this project growing.
As I am working for TreeFam, the database of phylogenetic trees,
I am particularly interesting in the vi…
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Hello,
There seems to be a step missing in the wiki on viewing, in the [viewing alignments](https://github.com/vgteam/vg/wiki/visualization#viewing-alignments) section. In the last line of code, `cyc…
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```
Hey guys!
Thanks for the great work so far.
It is really good to see this project growing.
As I am working for TreeFam, the database of phylogenetic trees,
I am particularly interesting in the vi…
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Hello @mrvollger
I am trying to use miropeats for the visualization of 2 sequence alignment. However, I am struggling with some problems.
I am trying to run the miropeats.rmk, but it gives me t…
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Hi there,Do I need full-length transcripts to use ESPRESSO? For example, if the reads are not full-length, do they need to be filtered out?
Why do different positions of the same transcript support d…
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Hi,
I am using hifiasm 0.19.8-r603 to do human genome assembly using hifi-only data. After the assembly, I found there is a interchromosomam misjoin reported by `paftools.js misjoin -c centromeres…
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Is there a way to increase the visibility of SNPs at wider views? In the example below, I can see SNP differences between alignments in a 56 kb window, but not in a 140 kb window, which encompasses th…