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gamcil
/
clinker
Gene cluster comparison figure generator
MIT License
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Running clinker via spyder
#111
Wanjofu
opened
2 weeks ago
0
Renaming coding sequence back to gene number
#110
timeresistance1996
opened
1 month ago
3
Broken pipe error when using clinker to plot gene clusters
#109
jonng2024
closed
3 weeks ago
2
Gene and species limit
#108
IzenR
closed
1 month ago
1
try example encouter error
#107
nongbaoting
opened
5 months ago
0
Problem with -gf and -cm parameteres
#106
mattbird567
opened
7 months ago
3
-gf/--gene_functions not working?
#105
mattbird567
closed
7 months ago
0
Possible bug in cluster similarity output (-mo option)
#104
dileep-kishore
opened
7 months ago
0
Locus inversion showing incorrect locations
#103
AthinaGav
opened
8 months ago
0
some issues for -mo --matrix_out parameter
#102
Yuki0902
opened
8 months ago
2
The output result has no information
#101
yuezhiTang
closed
6 months ago
4
Errors in using gff and faa file
#100
Xinpeng021001
opened
12 months ago
0
Error in clinker HTML plotting function
#99
Nitin123-4
opened
1 year ago
0
ValueError: not enough values to unpack (expected 2, got 1)
#98
neelam19051
opened
1 year ago
0
Use clinker to visualize individual exons rather than whole gene?
#97
JulieDaz
opened
1 year ago
0
How to visualize a gene on a large chromosome?
#96
JulieDaz
closed
1 year ago
0
the legend
#95
Oelsakha
closed
1 year ago
4
update 0.0.28
#94
oclaisse
opened
1 year ago
3
Can't save changes to session
#93
camilo-monge
closed
1 year ago
2
Similarity score and plotting
#92
LemoAlex
opened
1 year ago
1
Conda package errors
#91
Anto007
closed
1 year ago
3
protein groups and similarity
#90
galacmr
closed
1 year ago
2
Clinker issue: Blocks instead of arrows
#89
clpas
opened
1 year ago
2
How to only generate html files?
#88
pavlohrab
closed
1 year ago
2
clustermap loading slow
#87
yzjie6
closed
1 year ago
1
docs on gff+fasta
#86
nick-youngblut
opened
2 years ago
2
Export SVG instead of html
#85
innovate-invent
opened
2 years ago
0
Clinker usage
#84
EmaBoni
closed
1 year ago
9
Clink does not show any features
#83
MaximePolicarpo
opened
2 years ago
1
Feature request: set font style, link color and gene color
#82
clf-bio
opened
2 years ago
0
Using clinker in windows Cmd shell, only alignement of last name sequences
#81
CWoudstra
opened
2 years ago
5
Questions
#80
yga18
opened
2 years ago
0
Circular sequence panning
#79
erinyoung
closed
3 months ago
0
How to load a session file ?
#78
lireo
closed
2 years ago
2
Truncating the middle of gene clusters & gene group legend
#77
wearegroot91
opened
2 years ago
2
Grouping by function rather than similarity
#76
gamcil
closed
2 years ago
0
ERROR in matrix.select
#75
dooguypapua
closed
2 years ago
2
Issue with running automatically on multiple files due to (BUTTON)clinker screen
#74
ghoresh11
opened
2 years ago
2
Gene label type issue
#73
RvV1979
opened
3 years ago
0
Clinker just stalls without producing output?
#72
Arzamasov
opened
3 years ago
7
gene model colouring issue
#71
ArtemPankin
opened
3 years ago
1
Align Error: seq contains letters not in the alphabet
#70
LeoBusse
closed
3 years ago
2
cluster similarity matrix
#69
azazelsan
opened
3 years ago
3
Error in align
#68
kabilov
closed
3 years ago
5
GFF+Fasta files without line wrapping doesn't display properly
#67
sean-bam
opened
3 years ago
1
Gene labels not extracting correctly
#66
sean-bam
opened
3 years ago
0
Elaborate on the input file contents
#65
multimeric
closed
3 years ago
4
Error in plot Visualization
#64
uneeb-bot
opened
3 years ago
5
Feature request: Showing mobile genetic elements in the figure
#63
Korkerino
opened
3 years ago
0
[Feature request] option to indicate subsection of Genbank file
#62
dutchscientist
opened
3 years ago
3
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