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Compare transcriptomes of B-ALL cells from our RNA-seq to the transcriptomes from the paper:
`Single-cell functional genomics reveals determinants of sensitivity and resistance to natural killer cells…
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https://github.com/alexdobin/STAR/blob/master/RELEASEnotes.md
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Hi,
Thank a lot for this tools.
I have some 10x genomics scRNA-seq 3'data. So I have one bam file per sample , with barcoded reads represented each cell. I was wondering if I can use this tools…
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**Primary Wrangler:**
Wei
**Secondary Wrangler:**
Enrique
**Associated files:**
Google Drive: https://drive.google.com/drive/folders/1gTWohslenXt_hKb7J7PMBUQrKhWHcDEx?usp=sharing
Project: https://cont…
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pbmcs
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Sometimes I find the results from rapids KNN and UMAP very weird. The majoy data points are in center and super small (see below). At the beginning I thought it is the data issue. Today I ran the same…
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This is from Marty on our 10X protocol:
> Experimental procedures followed established techniques using the Chromium Single Cell 5’ Library & Gel Bead Kit (10x Genomics; https://assets.ctfassets.ne…
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Hi, thank you for your work, which has made our single cell analysis much faster.
However, when the nnz of the matrix exceeds the maximum limit of 32 bits, the preprocessing process needs to be perfo…
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**Background**:
Researchers often seek to integrate their findings from different techniques, and by utilizing single-cell data, an extra layer of knowledge can be added to the analysis of cancer ge…
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Hi Friends
Really cool altas you guys have build - i would love to try your annotation tool. However i'm have trouble installing the package?
Here is the error i get:
> devtools::install_git…