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### Describe the bug
During the merge, KG-IDG produces a large number of "node id [id] has no CURIE prefix" and "Invalid predicate CURIE" errors, though it isn't immediately clear *which source* t…
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Similar to the work on variant index (#3350), we would like to serve a `gwas_study_index` dataset through OS + API.
This dataset is created by different upstream ETL processes ([gentropy](https://g…
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Hi,
I‘m seeking for your kindly help. I tried to used SingleR in Stereopy to annotate the cell for saw8 output and my ref is BlueprintEncodeData.h5ad from SingleR. The code is as below, just like yo…
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Quite often I get this
![image](https://user-images.githubusercontent.com/44973249/129745063-13b47d84-087a-4734-a326-18338124c480.png)
it does not seem to be gene-specific (and is always for bot…
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Get SMILES for PubChem Compount (here for aspirin CID 2244):
* https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/fastidentity/cid/2244/JSON
Get AA sequence for a protein (check the sequence key)…
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@tglomb @Oliver-D-B,
Ich musste das Repo neu forken. Werde dem Fortschritt nun hier dokumentieren.
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First thanks for this great package! Especially it directly outputs three different gene ID types, which saves a lot of time when switching between different gene ID types.
I have a small suggestio…
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From gwas-info:
"I downloaded the catalog data from your website (gwas-association-downloaded_2022-05-19-EFO_0000729.tsv) and unfortunately recognised, that all occurrences of the gene name Y_RNA are…
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**The error happened while the guided tutorial on 8K PBMCs was attempted to be run. It run without problems, until the method "mcell_add_cgraph_from_mat_bknn(mat_id="test", gset_id = "test_feats", gra…
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CNVkit is a best python package to infer copy number information from high-throughput sequencing data
Actually, We are very excited to find that you have provided new function within the software pac…