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Knowledge-Graph-Hub
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kg-idg
A Knowledge Graph to Illuminate the Druggable Genome
https://knowledge-graph-hub.github.io/kg-idg/
BSD 3-Clause "New" or "Revised" License
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Orphanet transform fails due to missing `ExternalReference`
#131
caufieldjh
opened
7 months ago
0
Fix 129
#130
caufieldjh
closed
1 year ago
0
Transforms fail due to `ImportError: cannot import name 'InformationResource' from 'biolink.model'`
#129
caufieldjh
closed
1 year ago
0
Remove references to subgraphs in Jenkinsfile
#128
caufieldjh
closed
1 year ago
0
Merge fails due to missing files
#127
caufieldjh
closed
1 year ago
0
Disable subgraph generation and Ensmallen install
#126
caufieldjh
closed
1 year ago
0
Subgraph generation fails due to error with Ensmallen
#125
caufieldjh
closed
1 year ago
0
Disable producing nt as workaround for #123
#124
caufieldjh
closed
1 year ago
0
Build fails due to AttributeError: 'EnumDefinition' object has no attribute 'range'
#123
caufieldjh
closed
1 year ago
0
Set up notebook for drug-based link prediction
#122
caufieldjh
closed
1 year ago
0
Fix missing publication_type in DrugCentral transforms
#121
caufieldjh
closed
1 year ago
1
Build fails due to missing `publication_type`s
#120
caufieldjh
closed
1 year ago
0
All s3cmd must be in venv
#119
caufieldjh
closed
1 year ago
0
Jenkins build can't find `s3cmd` sometimes
#118
caufieldjh
closed
1 year ago
1
Build fails when it hits `Make blazegraph journal` stage: `sbt: not found`
#117
caufieldjh
closed
1 year ago
1
Install `ensmallen` dependencies during Jenkins run
#116
caufieldjh
closed
1 year ago
0
Add ingest for drug indications from DrugCentral
#115
caufieldjh
closed
1 year ago
4
Fix ATC ingest
#114
caufieldjh
closed
1 year ago
1
Ingest HPO
#113
caufieldjh
closed
1 year ago
1
Include drug indications from DrugCentral
#112
caufieldjh
closed
1 year ago
0
Compressed graph incorrectly includes relative local path
#111
caufieldjh
closed
1 year ago
1
Additional fixes for graph build
#110
caufieldjh
closed
1 year ago
20
Bump pywin32 from 227 to 301
#109
dependabot[bot]
closed
1 year ago
0
Fix for DrugCentral ingest error and update to Py3.9
#108
caufieldjh
closed
1 year ago
0
Upgrade build image to Py3.9
#107
caufieldjh
closed
1 year ago
3
Convert to Poetry, add more linting and tests
#106
caufieldjh
closed
1 year ago
0
ATC ingest emits empty nodes/edges file
#105
justaddcoffee
closed
1 year ago
2
Add fresh Orphanet and OMIM transforms
#104
caufieldjh
closed
1 year ago
1
Refresh configs
#103
caufieldjh
closed
1 year ago
0
Ingest error breaks build
#102
caufieldjh
closed
1 year ago
2
let kgx freely update to get infores/knowledge source fixes in 1.7.2
#101
sierra-moxon
closed
2 years ago
2
Updates to transforms to address Biolink compatibility
#100
caufieldjh
closed
2 years ago
0
Build fails due to Koza validation error in atc transform
#99
caufieldjh
closed
2 years ago
1
Update for new koza
#98
caufieldjh
closed
2 years ago
0
Fixes for new koza ingest call behavior
#97
caufieldjh
closed
2 years ago
0
Build fixes for missing files; a source update too
#96
caufieldjh
closed
2 years ago
1
Build fixes, as per KG-Phenio
#95
caufieldjh
closed
2 years ago
1
MySQL startup issue breaks Jenkins run
#94
caufieldjh
closed
1 year ago
4
Add subgraph generation material from KG-PHENIO
#93
caufieldjh
closed
2 years ago
1
Fix merge and update ontology sources
#92
caufieldjh
closed
2 years ago
1
Merge fails due to pydantic error
#91
caufieldjh
closed
2 years ago
1
Updates for doing link prediction with NEAT
#90
caufieldjh
closed
2 years ago
1
Need a good ol' fashioned dependency fix
#89
caufieldjh
closed
2 years ago
1
Include side effects/adverse events from DrugCentral
#88
caufieldjh
closed
1 year ago
1
MONARCH and MONARCH_NODE nodes - where are they coming from?
#87
caufieldjh
opened
2 years ago
0
Need to be in venv to make project dir index
#86
caufieldjh
closed
2 years ago
1
Update Jenkinsfile for new multi_indexer operation
#85
caufieldjh
closed
2 years ago
1
Need to call multi_indexer as module
#84
caufieldjh
closed
2 years ago
1
Update reqs and Jenkins to use multi_indexer properly
#83
caufieldjh
closed
2 years ago
1
Add kghub-downloader
#82
caufieldjh
closed
2 years ago
1
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