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Dear administrator,
Could the barrnap be used to predict the rrna of *.fna.gz file?
I applied it on a *.fna.gz file, and the system reported the error:
![image](https://user-images.githubuser…
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I'm using `kb ref` command from [kallisto-bustools package](https://www.kallistobus.tools/kb_usage/kb_ref/) and RefSeq genome [mRatBN7.2](https://www.ncbi.nlm.nih.gov/assembly/GCF_015227675.2/) of _Ra…
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Hey, InstaPy worked flawlessly the last weeks. Now it automatically updated and I get this message before it stops:
```
--- Logging error ---
Traceback (most recent call last):
File "C:\Users\xD…
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I'm forwarding Debian bug #919778 (https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=919778) which deals with build time tests failing due to an alignment issue in MurmurHash. The mash binary is build…
satta updated
5 years ago
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See the attached sample: [BranchIfTest.zip](https://github.com/FNA-XNA/FNA/files/13206367/BranchIfTest.zip)
It has very simple shader that draws a shape in color, which is set in the following HLSL…
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Hello I'm trying to run autometa over my metagenomic data. I tried running it before with other dataset and it worked well. When I run it with his new dataset I got an error message appointing to a la…
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./viridic.bash projdir=test in=./test3.fna
The state is: run
Parameters for VIRIDIC are: projdir=/viridic/viridic_scripts/out in=/viridic/viridic_scripts/in/test3.fna
singularity run -B ".:/virid…
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I used kraken2-build --standard --threads 60 --db standrad_db/ --use-ftp to build standard database, it always doesn't work. What's the problem with me? How can I get the database into my Kraken2?
Th…
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在第六步计算基因丰度中,前面的pipline里面没有输出PIGC_cds.fna.saf。请问一下是PIGC_cds.fna.saf是怎么生成的呢?
SAF=./06_Abundance/PIGC_cds.fna.saf
mkdir sam sort_bam flagstat abundance
bwa mem -M -Y -t 8 -o sam/${SampleID}.sam ${Ge…
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Hello:
I'm running this command:
`prodigal -a data/trimmed_db/prod_query.faa -d data/trimmed_db/prod_query.fna -i data/raw/all_seqs.fna`
Being the all_seqs.fna a standard fasta file
The …