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https://mp.weixin.qq.com/s/9FQcagelA7H3Bw8UNmnDyA
ixxmu updated
2 years ago
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https://mp.weixin.qq.com/s/OQ-XlXOo3ZUJh4CXu6h8Og
ixxmu updated
2 years ago
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Based on LM7c (minimum) we create a mapping of 7 major cell types to create a single naming scheme.
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Hi,
using the update version of the tool I get a permanent fail at the and, even if I have the output files from the deconvolution methods.
The command is:
```
cd mrna-prot
cwltool mrna-pro…
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Hello @mblue9,
I tag you in case you have an idea of how to proceed.
For the pull request https://github.com/stemangiola/tidybulk/pull/139 we have this error
```
ERROR; return code from pthr…
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Hi all,
here's information about the deconvolution methods we would like to integrate:
- [x] [Bisque](https://github.com/cozygene/bisque)
- [x] [CIBERSORTx](https://cibersortx.stanford.edu/)
-…
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https://mp.weixin.qq.com/s/ItuEE3fLGPfeAnu24d1GLA
ixxmu updated
2 years ago
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https://mp.weixin.qq.com/s/q7X8j4_os94jB3lbzMN_vA
ixxmu updated
2 years ago
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Hi,
Recently, Errors always happen (Impute Cell Fractions) as follows, I don’t know how to fix it.
Errors were encountered in CIBERSORTx configuration, run aborted:
Error in mcfork() :
una…
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Hi @nina2727 ,
I have a data matrix having 20000 genes from 450 samples.
I am new with Cibersortx and have few queries. These may be naive questions:
1) In order to increase the speed for the ana…