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**Please confirm that you've checked the FAQ section:**
https://github.com/jolespin/veba/blob/main/FAQ.md
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If you still have a question, feel free to ask here.
Hello there, I have install…
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Hi.
Thank you for making this amazing tool.
I am currently using this tool to improve my metagenomic viral contigs obtained from MegaHIT.
So, I have 80 shotgun metagenomic samples which I did…
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Hi.
After your suggestion last time, I reassembled my data with metaSpades (single assembly) using (-k 21,33,55,77,99,127).
From the output assembly, I filtered viral contigs using Vibrant (1983…
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Dear DRAM team.
First, thanks for a great tool!
I work with viral contigs and have been using DRAM-v.py before which ran without issue when taken directly from Virsorter2.
What I am currently try…
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### Description of the bug
Hi,
I created a custom config file ~/.nextflow/config but SPAdes is still running with 10 threads and 64 GB RAM. Why?
This is the custom config file:
```
process {
…
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Hi,
I am trying to annotate virus contigs ( 5kb and above) identified via virsorter2 and deepvirfinder. However the mmseqs prefilter throws the following error:
```
[14:07:34] Executing genomad an…
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phrokka version: v1.4.1
Python version: Python 3.10.12
Operating System: Computing cluster
```Description```
I have run prodigal-gv on my viral genomes to get the ORFs (it also outputs a genba…
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Dear Developer,
I am trying genomad to find taxonomy for my viral contig. Prior to genomad, I performed spades to get assembled contigs and used this as an input for genomad. But I got the followin…
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Hi,
Thanks for developing this tool. I use it to predict viral classification. However, I meet some problems:
my command:
`genomad annotate ../checkv_contigs.fa genomad /public/zycheng/database/vir…
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**1. What were you trying to do?**
Run vg construct on the reference and the variants.
**2. What did you want to happen?**
Successfully build the graph.vg
**3. What actually happened?**
`…