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**LAST EDITED: Aug, 29, 2024**
See parent Epic for further information.
https://github.com/chanzuckerberg/single-cell/issues/644
See current draft for spatial support in SOMA https://docs.goog…
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**Describe your problem**
When using particle mode for picking in tomograms, RELION fails to write necessary output for further processing, Python traceback complains "ValueError: cannot insert rln…
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### Issue type
Bug
### TomoBEAR source
source code (via interactive MATLAB session)
### TomoBEAR version
v0.6.0
### Computing system
Standalone GPU workstation, HPC cluster (interactive computi…
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**Description**
**Sub-lineage of:** KP.3
**Earliest sequence:** 2024-3-9, Tasmania — EPI_ISL_19140364
**Most recent sequence:** 2024-6-16, Canada, Alberta — EPI_ISL_19222338
**Continents circulati…
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Running list of workflows to address in documentation:
- [ ] Download the data and run these commands to get the structure of a ribosome (involved because it includes many sub-tasks) (2 - pipeline …
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In PMID 20538592 an additional component of the nicalin-NOMO complex is characterized.
From this paper TMEM147 & NOMO2 were annotated to protein destabilization, I don't think this paper supports t…
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Dear all,
The proposal has been made to obsolete GO:0030685 nucleolar preribosome
see https://github.com/geneontology/go-ontology/issues/24626
Experimental annotations that need to be reviewe…
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I noticed that Sherlock output with python3 does not match my local output. This starts with small floating point differences in nearly all expression related items in `sim_data`. Does anyone else s…
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Dear all,
The proposal has been made to obsolete GO:0005844 polysome and GO:0042788 polysomal ribosome
see https://github.com/geneontology/go-ontology/issues/24651
Experimental annotations th…
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**Reported by cmungall on 2008-01-29 00:45 UTC**
in general a class should have zero, two or more subtypes.
eg
single_is_a_child SO:0000872-trans_spliced_mRNA SO:0000479-trans_spliced_transcript
…